ID E9HLD4_DAPPU Unreviewed; 203 AA.
AC E9HLD4;
DT 05-APR-2011, integrated into UniProtKB/TrEMBL.
DT 05-APR-2011, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=Retrotransposon gag domain-containing protein {ECO:0000259|Pfam:PF03732};
GN ORFNames=DAPPUDRAFT_115447 {ECO:0000313|EMBL:EFX67414.1};
OS Daphnia pulex (Water flea).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=6669 {ECO:0000313|EMBL:EFX67414.1, ECO:0000313|Proteomes:UP000000305};
RN [1] {ECO:0000313|EMBL:EFX67414.1, ECO:0000313|Proteomes:UP000000305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21292972; DOI=10.1126/science.1197761;
RA Colbourne J.K., Pfrender M.E., Gilbert D., Thomas W.K., Tucker A.,
RA Oakley T.H., Tokishita S., Aerts A., Arnold G.J., Basu M.K., Bauer D.J.,
RA Caceres C.E., Carmel L., Casola C., Choi J.H., Detter J.C., Dong Q.,
RA Dusheyko S., Eads B.D., Frohlich T., Geiler-Samerotte K.A., Gerlach D.,
RA Hatcher P., Jogdeo S., Krijgsveld J., Kriventseva E.V., Kultz D.,
RA Laforsch C., Lindquist E., Lopez J., Manak J.R., Muller J., Pangilinan J.,
RA Patwardhan R.P., Pitluck S., Pritham E.J., Rechtsteiner A., Rho M.,
RA Rogozin I.B., Sakarya O., Salamov A., Schaack S., Shapiro H., Shiga Y.,
RA Skalitzky C., Smith Z., Souvorov A., Sung W., Tang Z., Tsuchiya D., Tu H.,
RA Vos H., Wang M., Wolf Y.I., Yamagata H., Yamada T., Ye Y., Shaw J.R.,
RA Andrews J., Crease T.J., Tang H., Lucas S.M., Robertson H.M., Bork P.,
RA Koonin E.V., Zdobnov E.M., Grigoriev I.V., Lynch M., Boore J.L.;
RT "The ecoresponsive genome of Daphnia pulex.";
RL Science 331:555-561(2011).
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DR EMBL; GL732678; EFX67414.1; -; Genomic_DNA.
DR AlphaFoldDB; E9HLD4; -.
DR EnsemblMetazoa; EFX67414; EFX67414; DAPPUDRAFT_115447.
DR KEGG; dpx:DAPPUDRAFT_115447; -.
DR HOGENOM; CLU_083426_0_0_1; -.
DR InParanoid; E9HLD4; -.
DR PhylomeDB; E9HLD4; -.
DR Proteomes; UP000000305; Unassembled WGS sequence.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR PANTHER; PTHR33223; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR33223:SF6; TY3_CAPSID DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000000305}.
FT DOMAIN 21..93
FT /note="Retrotransposon gag"
FT /evidence="ECO:0000259|Pfam:PF03732"
FT COILED 52..79
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 203 AA; 23368 MW; DB55AC442C86C64C CRC64;
MGVTAESRPV KAREIGKQDR LRGDAADWHS DYIDHAADKE DYDAWEKAII SRFLTETEIE
NLKKQLNELK QIADQNTQTY VSRLNHLYDI IHGKEIVLDE TIAPPEAVVL ARSLRKIRGE
AKQKILLKGL LPKIVQAVWT RINVNSHYED VCEIVYAAET IVNRMEQNEE KRLKATIAGI
SAHEDEQDVE LQRQKRSFPN LKN
//
