ID E9I380_DAPPU Unreviewed; 482 AA.
AC E9I380;
DT 05-APR-2011, integrated into UniProtKB/TrEMBL.
DT 05-APR-2011, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=Retrotransposon gag domain-containing protein {ECO:0000259|Pfam:PF03732};
GN ORFNames=DAPPUDRAFT_121512 {ECO:0000313|EMBL:EFX61549.1};
OS Daphnia pulex (Water flea).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=6669 {ECO:0000313|EMBL:EFX61549.1, ECO:0000313|Proteomes:UP000000305};
RN [1] {ECO:0000313|EMBL:EFX61549.1, ECO:0000313|Proteomes:UP000000305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21292972; DOI=10.1126/science.1197761;
RA Colbourne J.K., Pfrender M.E., Gilbert D., Thomas W.K., Tucker A.,
RA Oakley T.H., Tokishita S., Aerts A., Arnold G.J., Basu M.K., Bauer D.J.,
RA Caceres C.E., Carmel L., Casola C., Choi J.H., Detter J.C., Dong Q.,
RA Dusheyko S., Eads B.D., Frohlich T., Geiler-Samerotte K.A., Gerlach D.,
RA Hatcher P., Jogdeo S., Krijgsveld J., Kriventseva E.V., Kultz D.,
RA Laforsch C., Lindquist E., Lopez J., Manak J.R., Muller J., Pangilinan J.,
RA Patwardhan R.P., Pitluck S., Pritham E.J., Rechtsteiner A., Rho M.,
RA Rogozin I.B., Sakarya O., Salamov A., Schaack S., Shapiro H., Shiga Y.,
RA Skalitzky C., Smith Z., Souvorov A., Sung W., Tang Z., Tsuchiya D., Tu H.,
RA Vos H., Wang M., Wolf Y.I., Yamagata H., Yamada T., Ye Y., Shaw J.R.,
RA Andrews J., Crease T.J., Tang H., Lucas S.M., Robertson H.M., Bork P.,
RA Koonin E.V., Zdobnov E.M., Grigoriev I.V., Lynch M., Boore J.L.;
RT "The ecoresponsive genome of Daphnia pulex.";
RL Science 331:555-561(2011).
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DR EMBL; GL734413; EFX61549.1; -; Genomic_DNA.
DR AlphaFoldDB; E9I380; -.
DR EnsemblMetazoa; EFX61549; EFX61549; DAPPUDRAFT_121512.
DR KEGG; dpx:DAPPUDRAFT_121512; -.
DR HOGENOM; CLU_019800_2_0_1; -.
DR InParanoid; E9I380; -.
DR PhylomeDB; E9I380; -.
DR Proteomes; UP000000305; Unassembled WGS sequence.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR PANTHER; PTHR33223; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR33223:SF6; TY3_CAPSID DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000305}.
FT DOMAIN 401..476
FT /note="Retrotransposon gag"
FT /evidence="ECO:0000259|Pfam:PF03732"
FT REGION 297..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 307..327
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 328..348
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EFX61549.1"
SQ SEQUENCE 482 AA; 55231 MW; AAC0CB24EBEECCCB CRC64;
KELGGSQYIT GDARDKVVDN LTTYLTQLKA DPLTFDPIVQ EIKTAHSKEV DFRTKAFKLF
KRELLFKQIY LGNYAKSLEL QVANQKERTE KEVDNVRRDF SKKLADCLVD NTRLTAEVDN
LQQSNVKQAT RIAELNSKVE DHQTSGESKS FFNEYETVKS DLEKAEDELS TKDEYIKNLK
DTLTQLKNDS KDKVKQLVDS YNALSIKHNS LENSCKTAIN EVTELKNNNS QLTAQLNNII
KDNLANLTDL SDQNVQLTTQ LTKLQQDVAT KQLSVDSLRQ TNKGLNIDIA TLQQQLTQQT
AQITQPPNMT PTPPTPPTPP TPPTAPIQNP LNQQQRQRTP SPDPNNVPLT KSHLRELYSQ
DERKSIPVYK GKRGDQLINN WLKDAERVAQ SAGWSAKDKI KYFSDRLRGD AADWHSEYID
HAADKEDYDA WEKALINRFL TETEIENLKK QLNELKQTPD QSTQTYVSRL NHLLRRRMYT
RI
//
