ID F0ID81_9FLAO Unreviewed; 574 AA.
AC F0ID81;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN Name=recJ {ECO:0000313|EMBL:EGD34983.1};
GN ORFNames=HMPREF9071_0471 {ECO:0000313|EMBL:EGD34983.1};
OS Capnocytophaga sp. oral taxon 338 str. F0234.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Capnocytophaga.
OX NCBI_TaxID=888059 {ECO:0000313|EMBL:EGD34983.1, ECO:0000313|Proteomes:UP000003023};
RN [1] {ECO:0000313|EMBL:EGD34983.1, ECO:0000313|Proteomes:UP000003023}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F0234 {ECO:0000313|EMBL:EGD34983.1,
RC ECO:0000313|Proteomes:UP000003023};
RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L.,
RA Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V.,
RA Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., Nguyen N., Okwuonu G.,
RA Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A.,
RA Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C.,
RA Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S.,
RA Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S.,
RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L.,
RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P.,
RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K.,
RA Petrosino J., Highlander S., Gibbs R.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGD34983.1}.
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DR EMBL; AEXX01000010; EGD34983.1; -; Genomic_DNA.
DR RefSeq; WP_009744921.1; NZ_GL872413.1.
DR AlphaFoldDB; F0ID81; -.
DR STRING; 888059.HMPREF9071_0471; -.
DR eggNOG; COG0608; Bacteria.
DR HOGENOM; CLU_009736_5_2_10; -.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000003023; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EGD34983.1};
KW Hydrolase {ECO:0000313|EMBL:EGD34983.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000003023}.
FT DOMAIN 87..237
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 319..440
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 458..564
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
SQ SEQUENCE 574 AA; 64376 MW; 41B580BD924B12A5 CRC64;
MPNKLVWDFL PIPMQEEIET LSQTLFSSTL PWQKTIACLL LQRGIHSFKQ AKEFFNPSLE
QLHNPFVMKD MDRAVERILL AIKHKENILI YGDYDVDGTC SVSILYLFLS KVYPNVSTYV
PDRYKEGYGI SFQGIDYAVD NDVSLIITLD CGIKGHEKVQ YAKGKGIEMI ITDHHTPAET
LPKAVAVLNP KRADCTYPYK ELCGCGIGFK LIQALCKSLQ LPSHTPYEFL DLVALATCAD
IVPITGENRV LVYFGLRQIN EQPSQVMTLL LASVPPPIQV RDLVFVAAPR INAAGRMAHA
QKAVDFLTQN ALEEASCLEF LNHKRKGADE QITQEALEQI VSNHEEEASA TVVFSKDWHK
GVIGIVASRL TETYYRPTIV FTQSGDVLTA SARSVKGYNL YEALCQCRDY LLQFGGHTAA
AGMTLLPENY LPFKKRFQEI VAQTLPEALR KPAITLSVEM PLKEITLPFY RCLQRFAPFG
PKNMTPIFLA YEVIAKNVFL MGNEGSHLRM TLTDSSLRQE FEAVGFGLGH KKSIVEKGQP
FTIAYELSQN TWKGTTSLQL VIKDIMPMIN MGNN
//
