ID F0S5R6_PSESL Unreviewed; 411 AA.
AC F0S5R6;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=Oligogalacturonate lyase domain-containing protein {ECO:0000259|Pfam:PF14583};
GN OrderedLocusNames=Pedsa_3711 {ECO:0000313|EMBL:ADY54240.1};
OS Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / CCUG
OS 39354 / LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pseudopedobacter.
OX NCBI_TaxID=762903 {ECO:0000313|EMBL:ADY54240.1, ECO:0000313|Proteomes:UP000000310};
RN [1] {ECO:0000313|EMBL:ADY54240.1, ECO:0000313|Proteomes:UP000000310}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 /
RC NCIMB 13643 {ECO:0000313|Proteomes:UP000000310};
RX PubMed=22180808; DOI=10.4056/sigs.2154937;
RA Liolios K., Sikorski J., Lu M., Nolan M., Lapidus A., Lucas S., Hammon N.,
RA Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S.,
RA Huntemann M., Ivanova N., Pagani I., Mavromatis K., Ovchinikova G.,
RA Pati A., Chen A., Palaniappan K., Land M., Hauser L., Brambilla E.M.,
RA Kotsyurbenko O., Rohde M., Tindall B.J., Abt B., Goker M., Detter J.C.,
RA Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P.,
RA Kyrpides N.C.;
RT "Complete genome sequence of the gliding, heparinolytic Pedobacter saltans
RT type strain (113).";
RL Stand. Genomic Sci. 5:30-40(2011).
RN [2] {ECO:0000313|Proteomes:UP000000310}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 /
RC NCIMB 13643 {ECO:0000313|Proteomes:UP000000310};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Ovchinnikova G., Lu M.,
RA Detter J.C., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E.,
RA Klenk H.-P., Eisen J.A.;
RT "The complete genome of Pedobacter saltans DSM 12145.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002545; ADY54240.1; -; Genomic_DNA.
DR RefSeq; WP_013634721.1; NC_015177.1.
DR AlphaFoldDB; F0S5R6; -.
DR STRING; 762903.Pedsa_3711; -.
DR KEGG; psn:Pedsa_3711; -.
DR eggNOG; COG0823; Bacteria.
DR HOGENOM; CLU_610983_0_0_10; -.
DR OrthoDB; 8432779at2; -.
DR Proteomes; UP000000310; Chromosome.
DR GO; GO:0047487; F:oligogalacturonide lyase activity; IEA:InterPro.
DR GO; GO:0045490; P:pectin catabolic process; IEA:InterPro.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR027946; Ogl_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR Pfam; PF14583; Pectate_lyase22; 1.
DR SUPFAM; SSF82171; DPP6 N-terminal domain-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000310};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..411
FT /note="Oligogalacturonate lyase domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003258165"
FT DOMAIN 37..406
FT /note="Oligogalacturonate lyase"
FT /evidence="ECO:0000259|Pfam:PF14583"
SQ SEQUENCE 411 AA; 47879 MW; B3AFA5249268D49F CRC64;
MIEKRISSML LFAIVAASNL MAQPVLETGG KKMPNEWIDK ETGHKVIKLI RKEGNFASFY
FHNNPFIPGK NGEGDRMVFY GNDQYKGDGN GNFLYTVNLK DFSVKQLTFG KQRKTGEILA
VKQHKIYFQS RDTIYAVNAD TQKTEVVYVF PEDFKGNITT INADETLLAG AKSTEEEKEI
YKNNPEKKDY FNKIYEAKLP RTLFTIDIKN KQLNKIFTDS AWLNHIQFSP SNPKLLMFCH
EGPWHKVDRI WTIDIDTKNV QLIHKRTMNM EIAGHEWFDK RGNIIWFDLQ MPRGEKFFVA
GVDLQTKKEK RYELDRNEWS VHYTSSNDAK LFAGDGGDEN AVAKAPNGKW IYLFKPEGDR
FVSEKLVDMK HHKYKFEPNV HFSPDQKWVI FRANFEGSEQ IYAVEIQKHK K
//
