ID F0S6N6_PSESL Unreviewed; 804 AA.
AC F0S6N6;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE SubName: Full=TonB-dependent receptor plug {ECO:0000313|EMBL:ADY51112.1};
GN OrderedLocusNames=Pedsa_0531 {ECO:0000313|EMBL:ADY51112.1};
OS Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / CCUG
OS 39354 / LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pseudopedobacter.
OX NCBI_TaxID=762903 {ECO:0000313|EMBL:ADY51112.1, ECO:0000313|Proteomes:UP000000310};
RN [1] {ECO:0000313|EMBL:ADY51112.1, ECO:0000313|Proteomes:UP000000310}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 /
RC NCIMB 13643 {ECO:0000313|Proteomes:UP000000310};
RX PubMed=22180808; DOI=10.4056/sigs.2154937;
RA Liolios K., Sikorski J., Lu M., Nolan M., Lapidus A., Lucas S., Hammon N.,
RA Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S.,
RA Huntemann M., Ivanova N., Pagani I., Mavromatis K., Ovchinikova G.,
RA Pati A., Chen A., Palaniappan K., Land M., Hauser L., Brambilla E.M.,
RA Kotsyurbenko O., Rohde M., Tindall B.J., Abt B., Goker M., Detter J.C.,
RA Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P.,
RA Kyrpides N.C.;
RT "Complete genome sequence of the gliding, heparinolytic Pedobacter saltans
RT type strain (113).";
RL Stand. Genomic Sci. 5:30-40(2011).
RN [2] {ECO:0000313|Proteomes:UP000000310}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 /
RC NCIMB 13643 {ECO:0000313|Proteomes:UP000000310};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Ovchinnikova G., Lu M.,
RA Detter J.C., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E.,
RA Klenk H.-P., Eisen J.A.;
RT "The complete genome of Pedobacter saltans DSM 12145.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CP002545; ADY51112.1; -; Genomic_DNA.
DR RefSeq; WP_013631615.1; NC_015177.1.
DR AlphaFoldDB; F0S6N6; -.
DR STRING; 762903.Pedsa_0531; -.
DR KEGG; psn:Pedsa_0531; -.
DR eggNOG; COG4206; Bacteria.
DR HOGENOM; CLU_017617_1_0_10; -.
DR OrthoDB; 606851at2; -.
DR Proteomes; UP000000310; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-KW.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR Gene3D; 2.170.130.10; TonB-dependent receptor, plug domain; 1.
DR InterPro; IPR013784; Carb-bd-like_fold.
DR InterPro; IPR041700; OMP_b-brl_3.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR037066; Plug_dom_sf.
DR InterPro; IPR039426; TonB-dep_rcpt-like.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR PANTHER; PTHR30069; TONB-DEPENDENT OUTER MEMBRANE RECEPTOR; 1.
DR PANTHER; PTHR30069:SF29; VITAMIN B12 TRANSPORTER BTUB; 1.
DR Pfam; PF13620; CarboxypepD_reg; 1.
DR Pfam; PF14905; OMP_b-brl_3; 1.
DR Pfam; PF07715; Plug; 1.
DR SUPFAM; SSF56935; Porins; 1.
DR SUPFAM; SSF49452; Starch-binding domain-like; 1.
PE 4: Predicted;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Receptor {ECO:0000313|EMBL:ADY51112.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000310};
KW Signal {ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..804
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003258206"
FT DOMAIN 140..226
FT /note="TonB-dependent receptor plug"
FT /evidence="ECO:0000259|Pfam:PF07715"
FT DOMAIN 394..802
FT /note="Outer membrane protein beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF14905"
SQ SEQUENCE 804 AA; 90660 MW; 849BFF2BB2BE87EA CRC64;
MSKLKVAFFL FLLLQSAQQL FSQVSTVAVS GIVESGSDKA KLPYVNVVLK NKKDSSFVTG
TVTNEEGRFL INNVKPGNYL IQVSFMGYES YSSSLFVGSL SPNIDIPAIV LLRDARLLRE
ISVIAKQDNL SSGMDKKTYT VQDNISQSGG SVLQSMQNLP GVTVQEGKVQ LRGSDKVTVL
IDGRQTALTG FGNQIGLDNI PASAIDKIEV INNPSAKYEA NGNAGIINIV IKKEKQEGLN
GKVMLTTGLG ALWERKENLP TIRPQYTATP KINPSLALNY RKDKINLFVQ ADNLYTQTLN
KNEYVTRTYD DGQIINSQLK RNRNTNFFTG KAGIDWNINS QNTLTISGLY GSEKIIDRGD
QPFFNGDITQ RLRLWQFLED ELKTTAMATA SYQHKFKEAG HLLNAGFNYT FHREDEKYFY
DNYLPNSTGT DAFKLLSDEK VYDVNLDYIK PFRYGRIETG LKLRNRNIPT NMNFIPGQNS
VLDVSAGGWA NYKELIPAWY GNYIYENEKW EAEAGLRVEY VKIQYDVNPN HSTYKSDGYN
YTQPFPNLRL AYKLSDYNKL SVFYNRRVDR PNEVDIRIFP KYDDAEIIKV GNPALKPQFT
NSLELGYKHT WDKGYVYSAL YHRFSDGTIT RISSIVPGST LVYAVFQNAG KSYNSGIEGV
WNQKINAYYS FSINGNIYRN QINAFSVESL YPKPATFSAD KESMFSGNIK LNNIFRFAKG
TDAQLSAVCL APDIIPQGRL GSRFSVDMGV KKSVQSGKGE LFFNATDLLN TMVVNKEIRA
AGFRYTSNDY YETQVIRLGY SYKF
//
