ID F0SZ73_SYNGF Unreviewed; 785 AA.
AC F0SZ73;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE SubName: Full=Diguanylate cyclase and metal dependent phosphohydrolase {ECO:0000313|EMBL:ADY57191.1};
GN OrderedLocusNames=Sgly_2922 {ECO:0000313|EMBL:ADY57191.1};
OS Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Desulfitobacteriaceae;
OC Syntrophobotulus.
OX NCBI_TaxID=645991 {ECO:0000313|EMBL:ADY57191.1, ECO:0000313|Proteomes:UP000007488};
RN [1] {ECO:0000313|EMBL:ADY57191.1, ECO:0000313|Proteomes:UP000007488}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 8271 / FlGlyR {ECO:0000313|Proteomes:UP000007488};
RX PubMed=21886864;
RA Han C., Mwirichia R., Chertkov O., Held B., Lapidus A., Nolan M., Lucas S.,
RA Hammon N., Deshpande S., Cheng J.F., Tapia R., Goodwin L., Pitluck S.,
RA Huntemann M., Liolios K., Ivanova N., Pagani I., Mavromatis K.,
RA Ovchinikova G., Pati A., Chen A., Palaniappan K., Land M., Hauser L.,
RA Brambilla E.M., Rohde M., Spring S., Sikorski J., Goker M., Woyke T.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA Klenk H.P., Detter J.C.;
RT "Complete genome sequence of Syntrophobotulus glycolicus type strain
RT (FlGlyR).";
RL Stand. Genomic Sci. 4:371-380(2011).
RN [2] {ECO:0000313|Proteomes:UP000007488}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 8271 / FlGlyR {ECO:0000313|Proteomes:UP000007488};
RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Mikhailova N.,
RA Chertkov O., Held B., Detter J.C., Tapia R., Han C., Land M., Hauser L.,
RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S.,
RA Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Syntrophobotulus glycolicus DSM 8271.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002547; ADY57191.1; -; Genomic_DNA.
DR RefSeq; WP_013626011.1; NC_015172.1.
DR AlphaFoldDB; F0SZ73; -.
DR STRING; 645991.Sgly_2922; -.
DR KEGG; sgy:Sgly_2922; -.
DR eggNOG; COG2199; Bacteria.
DR eggNOG; COG3437; Bacteria.
DR eggNOG; COG3835; Bacteria.
DR HOGENOM; CLU_357117_0_0_9; -.
DR OrthoDB; 9798833at2; -.
DR Proteomes; UP000007488; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00077; HDc; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 1.10.3210.10; Hypothetical protein af1432; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR008599; Diacid_rec.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR037522; HD_GYP_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR43155:SF2; CYCLIC DI-GMP PHOSPHODIESTERASE PA4108; 1.
DR PANTHER; PTHR43155; CYCLIC DI-GMP PHOSPHODIESTERASE PA4108-RELATED; 1.
DR Pfam; PF05651; Diacid_rec; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13487; HD_5; 1.
DR Pfam; PF08448; PAS_4; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF109604; HD-domain/PDEase-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS51832; HD_GYP; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Reference proteome {ECO:0000313|Proteomes:UP000007488}.
FT DOMAIN 318..388
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 473..606
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 596..785
FT /note="HD-GYP"
FT /evidence="ECO:0000259|PROSITE:PS51832"
SQ SEQUENCE 785 AA; 88896 MW; 97400DB038B4C2B2 CRC64;
MDNILKMNLD TLREVSAMIS AETGGSLIIC DHQGEIIEAT DTTRIGRKHM GSIIIRSGQT
DEAVIDEEQA EHFRKLGTDT NAGYSHVITV LGRRAGSLGL EGDPEKLKPI VRMAAKTIGI
YISRYHKEKE KNTILEKMAE LAGSIVCKKD NKIDFQVLTE DIRFITEARF AVLDLYDPVR
DVSTLTAISG EEEDLREFEK ILKGQVGGIE FSRSDIYIKK LQNNRNISFN SFVYFSQEFI
PLKLARTLEN QFELGKVTIL EIACQDKMIG NFSLLLSKET EIKNTEIAEL YAAQVGQLLV
RTQTETALRM SKGELKRARY ILDSFLEHSP NPICILDTKG NVIRVSSSGA KRMGLTPKMM
EGTNVAKMFS PAYFELFDER IREVNKNNRS FFYSDSMSLP SGKEGYMEYC LFPIDNQEDQ
TSLIGMVAYD VTRSREAEEK LKFISYHDAI TGLNNRLFFE MEIKNLPNCQ EDYPLTVLSI
DVDGLKAVNE TMGHEYGNQL LRELSRILEN SIRNNDLLAR TGGDEFAVVL YKTDQKAAES
VVTRIIDNIV EHNRQSSDIS ISVSIGQATA YSAEENINEI FKKADEHMYH NKLFQKQSSR
SQIINSLMAA LAERDYITQG HANRLLDLSV KVGTRKVLDP RMITALALLS QVHDVGKVGI
PDRILFKPGK LTEEEWEVMR MHPEKGYRIA IVSPDLKDIA ELILKHHERW DGKGYPLGLK
GEDIPLECRI LSVVDSFDAM TSERPYSKPK SKEEAVQEIK RCSGTQFDPE IVELFIKIID
EDRVS
//
