GenomeNet

Database: UniProt
Entry: F0TCS5_METLA
LinkDB: F0TCS5_METLA
Original site: F0TCS5_METLA 
ID   F0TCS5_METLA            Unreviewed;       212 AA.
AC   F0TCS5;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   03-MAY-2011, sequence version 1.
DT   24-JAN-2024, entry version 60.
DE   RecName: Full=Large ribosomal subunit protein uL1 {ECO:0000256|HAMAP-Rule:MF_01318};
GN   Name=rpl1 {ECO:0000256|HAMAP-Rule:MF_01318};
GN   OrderedLocusNames=Metbo_2251 {ECO:0000313|EMBL:ADZ10465.1};
OS   Methanobacterium lacus (strain AL-21).
OC   Archaea; Euryarchaeota; Methanomada group; Methanobacteria;
OC   Methanobacteriales; Methanobacteriaceae; Methanobacterium.
OX   NCBI_TaxID=877455 {ECO:0000313|EMBL:ADZ10465.1, ECO:0000313|Proteomes:UP000007490};
RN   [1] {ECO:0000313|Proteomes:UP000007490}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AL-21 {ECO:0000313|Proteomes:UP000007490};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA   Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Cadillo-Quiroz H.,
RA   Imachi H., Zinder S., Liu W., Woyke T.;
RT   "Complete sequence of Methanobacterium sp. AL-21.";
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADZ10465.1, ECO:0000313|Proteomes:UP000007490}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AL-21 {ECO:0000313|EMBL:ADZ10465.1,
RC   ECO:0000313|Proteomes:UP000007490};
RX   PubMed=24449792; DOI=10.1099/ijs.0.059964-0;
RA   Cadillo-Quiroz H., Brauer S.L., Goodson N., Yavitt J.B., Zinder S.H.;
RT   "Methanobacterium paludis sp. nov. and a novel strain of Methanobacterium
RT   lacus isolated from northern peatlands.";
RL   Int. J. Syst. Evol. Microbiol. 64:1473-1480(2014).
CC   -!- FUNCTION: Binds directly to 23S rRNA. Probably involved in E site tRNA
CC       release. {ECO:0000256|HAMAP-Rule:MF_01318}.
CC   -!- FUNCTION: Probably involved in E site tRNA release (By similarity).
CC       Binds directly to 23S rRNA. {ECO:0000256|ARBA:ARBA00024742}.
CC   -!- FUNCTION: Protein L1 is also a translational repressor protein, it
CC       controls the translation of its operon by binding to its mRNA.
CC       {ECO:0000256|HAMAP-Rule:MF_01318}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit.
CC       {ECO:0000256|ARBA:ARBA00011838, ECO:0000256|HAMAP-Rule:MF_01318}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL1 family.
CC       {ECO:0000256|ARBA:ARBA00010531, ECO:0000256|HAMAP-Rule:MF_01318}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002551; ADZ10465.1; -; Genomic_DNA.
DR   RefSeq; WP_013645816.1; NC_015216.1.
DR   AlphaFoldDB; F0TCS5; -.
DR   STRING; 877455.Metbo_2251; -.
DR   GeneID; 10278717; -.
DR   KEGG; mel:Metbo_2251; -.
DR   eggNOG; arCOG04289; Archaea.
DR   HOGENOM; CLU_062853_4_0_2; -.
DR   OMA; GPRNKMP; -.
DR   OrthoDB; 10382at2157; -.
DR   Proteomes; UP000007490; Chromosome.
DR   GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00403; Ribosomal_L1; 1.
DR   Gene3D; 3.30.190.20; -; 1.
DR   Gene3D; 3.40.50.790; -; 1.
DR   HAMAP; MF_01318_A; Ribosomal_L1_A; 1.
DR   InterPro; IPR002143; Ribosomal_uL1.
DR   InterPro; IPR023674; Ribosomal_uL1-like.
DR   InterPro; IPR028364; Ribosomal_uL1/biogenesis.
DR   InterPro; IPR016095; Ribosomal_uL1_3-a/b-sand.
DR   InterPro; IPR023669; Ribosomal_uL1_arc.
DR   PANTHER; PTHR36427:SF3; 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR36427; 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL; 1.
DR   Pfam; PF00687; Ribosomal_L1; 1.
DR   PIRSF; PIRSF002155; Ribosomal_L1; 1.
DR   SUPFAM; SSF56808; Ribosomal protein L1; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000007490};
KW   Repressor {ECO:0000256|HAMAP-Rule:MF_01318};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW   Rule:MF_01318};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW   Rule:MF_01318}; RNA-binding {ECO:0000256|HAMAP-Rule:MF_01318};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01318};
KW   Translation regulation {ECO:0000256|HAMAP-Rule:MF_01318};
KW   tRNA-binding {ECO:0000256|HAMAP-Rule:MF_01318}.
SQ   SEQUENCE   212 AA;  23493 MW;  FD5CAD5349A3A5C3 CRC64;
     MKEEILEAVK KAKEDSKPRN FTQSIDVVIT IKDLDVKKPE NRIDEEVFLP NGRGKDVSVV
     FIADGELALQ AENAGASLVI TKEGLESFGK DRKAAKKVAN QNDFFVAQAD FMPLVGRFLG
     PVLGPRKKMP KPVPASAKPE PLMERLKNTA KVRIKDQPVI QAIVGSQEMD DEQIAENIEA
     ILQILDQKLE KGRSQIKSMY IKTTMGPVAR VI
//
DBGET integrated database retrieval system