ID F0XU13_GROCL Unreviewed; 644 AA.
AC F0XU13;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=Ribosomal RNA-processing protein 42 {ECO:0000256|ARBA:ARBA00042523};
GN ORFNames=CMQ_4757 {ECO:0000313|EMBL:EFW98905.1};
OS Grosmannia clavigera (strain kw1407 / UAMH 11150) (Blue stain fungus)
OS (Graphiocladiella clavigera).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Leptographium.
OX NCBI_TaxID=655863 {ECO:0000313|Proteomes:UP000007796};
RN [1] {ECO:0000313|EMBL:EFW98905.1, ECO:0000313|Proteomes:UP000007796}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=kw1407 / UAMH 11150 {ECO:0000313|Proteomes:UP000007796};
RX PubMed=21262841; DOI=10.1073/pnas.1011289108;
RA DiGuistini S., Wang Y., Liao N.Y., Taylor G., Tanguay P., Feau N.,
RA Henrissat B., Chan S.K., Hesse-Orce U., Alamouti S.M., Tsui C.K.M.,
RA Docking R.T., Levasseur A., Haridas S., Robertson G., Birol I., Holt R.A.,
RA Marra M.A., Hamelin R.C., Hirst M., Jones S.J.M., Bohlmann J., Breuil C.;
RT "Genome and transcriptome analyses of the mountain pine beetle-fungal
RT symbiont Grosmannia clavigera, a lodgepole pine pathogen.";
RL Proc. Natl. Acad. Sci. U.S.A. 108:2504-2509(2011).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the RNase PH family.
CC {ECO:0000256|ARBA:ARBA00006678}.
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DR EMBL; GL630006; EFW98905.1; -; Genomic_DNA.
DR RefSeq; XP_014168388.1; XM_014312913.1.
DR AlphaFoldDB; F0XU13; -.
DR STRING; 655863.F0XU13; -.
DR GeneID; 25978003; -.
DR eggNOG; KOG1612; Eukaryota.
DR HOGENOM; CLU_425156_0_0_1; -.
DR InParanoid; F0XU13; -.
DR OrthoDB; 2070785at2759; -.
DR Proteomes; UP000007796; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000176; C:nuclear exosome (RNase complex); IEA:UniProt.
DR Gene3D; 3.30.230.70; GHMP Kinase, N-terminal domain; 1.
DR InterPro; IPR027408; PNPase/RNase_PH_dom_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR PANTHER; PTHR11097:SF8; EXOSOME COMPLEX COMPONENT RRP42; 1.
DR PANTHER; PTHR11097; EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW Reference proteome {ECO:0000313|Proteomes:UP000007796}.
FT REGION 1..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 264..283
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 320..360
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 526..545
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 553..599
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 562..596
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 644 AA; 69201 MW; 64AE61ED475562DA CRC64;
MAPRKNKARA RSSSTSLGES GPEEEIRTAA TRPRATGKKA AQSSDGWDVW QDTVREQEAD
RVKQYMSTFQ EKVASMRKKA VQDMRQSEES RVRTAYGNGL TETARSEMMM PSRLPLREAS
EEVLGLFQSM LSRFERTNNE LREQCSCLTG FSASTGSTGP SLSVKAAWQK DHEEARKLLQ
YGRAYGDNLV HEIIVPQTDG NGSAPIAHAD SIDLNCTGRS AIGLFPRSRA TLVGGQTWGE
TARTQMQALT GIVRTLPYEE KVEIGGSKTP PIRPDGRSPT QFRPLRAETG MLPGANGSAR
VCFSDGTEAI VGVKADVEKT RRTGREDDDD GDEDVEGGEK GGEDKKDGNG VSASTSASST
SGASSWVEVT VEIPGLRDDD SNTVFLAALL AEALLADGNL AQALRINRRF HWKLYLDILL
ISPPLSYPLP LLSLTSHLAL LATRLPRLVS EGDEDPFFND DWDASTYLYP RATEAGAEAG
AAAQQPFSRP PITLLVMTVG DSILFDPTSE ELAVANAVLA VSVGASEPPR PAETTTAPSS
SSSLRLLAIR TIDPPSRLTA PGTPYNPDTK VKQQQQQQQA AGSSAPQENS TPSRLPETEA
VYGVWRAPRG GARVGLLAAM TQRVLEKGGV AEEVFAGLGA VEVV
//
