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Database: UniProt
Entry: F0YE05_AURAN
LinkDB: F0YE05_AURAN
Original site: F0YE05_AURAN 
ID   F0YE05_AURAN            Unreviewed;       600 AA.
AC   F0YE05;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   03-MAY-2011, sequence version 1.
DT   24-JAN-2024, entry version 42.
DE   RecName: Full=Protein SDA1 {ECO:0000256|RuleBase:RU365057};
DE   Flags: Fragment;
GN   ORFNames=AURANDRAFT_29008 {ECO:0000313|EMBL:EGB06473.1};
OS   Aureococcus anophagefferens (Harmful bloom alga).
OC   Eukaryota; Sar; Stramenopiles; Ochrophyta; Pelagophyceae; Pelagomonadales;
OC   Aureococcus.
OX   NCBI_TaxID=44056 {ECO:0000313|Proteomes:UP000002729};
RN   [1] {ECO:0000313|EMBL:EGB06473.1, ECO:0000313|Proteomes:UP000002729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP 1984 {ECO:0000313|Proteomes:UP000002729};
RX   PubMed=21368207; DOI=10.1073/pnas.1016106108;
RA   Gobler C.J., Berry D.L., Dyhrman S.T., Wilhelm S.W., Salamov A.,
RA   Lobanov A.V., Zhang Y., Collier J.L., Wurch L.L., Kustka A.B., Dill B.D.,
RA   Shah M., VerBerkmoes N.C., Kuo A., Terry A., Pangilinan J., Lindquist E.A.,
RA   Lucas S., Paulsen I.T., Hattenrath-Lehmann T.K., Talmage S.C., Walker E.A.,
RA   Koch F., Burson A.M., Marcoval M.A., Tang Y.Z., Lecleir G.R., Coyne K.J.,
RA   Berg G.M., Bertrand E.M., Saito M.A., Gladyshev V.N., Grigoriev I.V.;
RT   "Niche of harmful alga Aureococcus anophagefferens revealed through
RT   ecogenomics.";
RL   Proc. Natl. Acad. Sci. U.S.A. 108:4352-4357(2011).
CC   -!- FUNCTION: Required for 60S pre-ribosomal subunits export to the
CC       cytoplasm. {ECO:0000256|RuleBase:RU365057}.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC       {ECO:0000256|RuleBase:RU365057}.
CC   -!- SIMILARITY: Belongs to the SDA1 family.
CC       {ECO:0000256|RuleBase:RU365057}.
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DR   EMBL; GL833134; EGB06473.1; -; Genomic_DNA.
DR   RefSeq; XP_009038659.1; XM_009040411.1.
DR   AlphaFoldDB; F0YE05; -.
DR   EnsemblProtists; EGB06473; EGB06473; AURANDRAFT_29008.
DR   GeneID; 20220652; -.
DR   KEGG; aaf:AURANDRAFT_29008; -.
DR   eggNOG; KOG2229; Eukaryota.
DR   InParanoid; F0YE05; -.
DR   OMA; AMYKTYK; -.
DR   OrthoDB; 5482564at2759; -.
DR   Proteomes; UP000002729; Unassembled WGS sequence.
DR   GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   GO; GO:0042273; P:ribosomal large subunit biogenesis; IEA:UniProtKB-UniRule.
DR   GO; GO:0000055; P:ribosomal large subunit export from nucleus; IEA:UniProtKB-UniRule.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR027312; Sda1.
DR   InterPro; IPR012977; SDA1_N.
DR   PANTHER; PTHR12730; HSDA/SDA1-RELATED; 1.
DR   PANTHER; PTHR12730:SF0; PROTEIN SDA1 HOMOLOG; 1.
DR   Pfam; PF08158; SDA1_HEAT; 1.
DR   SUPFAM; SSF48371; ARM repeat; 1.
PE   3: Inferred from homology;
KW   Nucleus {ECO:0000256|RuleBase:RU365057};
KW   Protein transport {ECO:0000256|RuleBase:RU365057};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002729};
KW   Ribosome biogenesis {ECO:0000256|RuleBase:RU365057};
KW   Transport {ECO:0000256|RuleBase:RU365057}.
FT   DOMAIN          69..457
FT                   /note="SDA1 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF08158"
FT   REGION          250..310
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          486..505
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          525..600
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        256..273
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        274..293
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        294..310
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        526..600
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         600
FT                   /evidence="ECO:0000313|EMBL:EGB06473.1"
SQ   SEQUENCE   600 AA;  66815 MW;  513E9FAFF922905C CRC64;
     MKVRQHTLPV LQNLLKRDPP AYKEEFEAIW RQYLSELEVF KLRSAEGEAA PGRLAKDGDE
     KRLAELATFV SHTCKHYDFA AQRFGPQLCR LLKDRCVGLA PELRLSLVQA CVLARSKGLL
     DPVELLELCF ELIRRVRDRA LRDELRTHVV NDVRRCARGG GESKGSQQAL MKKFQRCLFF
     HCGDASREGS DKSAKVALDA VVDLYGRGVW TCAPTVNCVG RACVDDRSKL ACTAIHFFLG
     IEQSPVLDEL DSDDEDARDA GKASDAIKKG RRDVDVHKHS KKTRKRERDT KKQLKRVKKL
     ARDATDRTRG DSKPVFPAIA LLDDPHKLCE RLLARLRAQK DKFEIRVAMM DLISRVACAH
     KLALLPFYSY VQRYLTAHQK DAPKLLAVFA QACHDLVPPD ELVAAARKIA DAFVSERNAP
     EAMALGINAL REVAGRCPAL LDEPEMLGFV RDLAAHAKHR DRSVVVAARG WINVVREHYP
     ALLHKKDRGR AHAASTREPA KYGAATAATA VEGEELLRAY ERGDLPEDFD DADDDGAGWV
     DVDDDDGGAE EDGADDDDEE EEVEDDDGDD DGDDEEAGED EDDGEEDDED DGEGGWEEAS
//
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