ID F0YE05_AURAN Unreviewed; 600 AA.
AC F0YE05;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 24-JAN-2024, entry version 42.
DE RecName: Full=Protein SDA1 {ECO:0000256|RuleBase:RU365057};
DE Flags: Fragment;
GN ORFNames=AURANDRAFT_29008 {ECO:0000313|EMBL:EGB06473.1};
OS Aureococcus anophagefferens (Harmful bloom alga).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Pelagophyceae; Pelagomonadales;
OC Aureococcus.
OX NCBI_TaxID=44056 {ECO:0000313|Proteomes:UP000002729};
RN [1] {ECO:0000313|EMBL:EGB06473.1, ECO:0000313|Proteomes:UP000002729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP 1984 {ECO:0000313|Proteomes:UP000002729};
RX PubMed=21368207; DOI=10.1073/pnas.1016106108;
RA Gobler C.J., Berry D.L., Dyhrman S.T., Wilhelm S.W., Salamov A.,
RA Lobanov A.V., Zhang Y., Collier J.L., Wurch L.L., Kustka A.B., Dill B.D.,
RA Shah M., VerBerkmoes N.C., Kuo A., Terry A., Pangilinan J., Lindquist E.A.,
RA Lucas S., Paulsen I.T., Hattenrath-Lehmann T.K., Talmage S.C., Walker E.A.,
RA Koch F., Burson A.M., Marcoval M.A., Tang Y.Z., Lecleir G.R., Coyne K.J.,
RA Berg G.M., Bertrand E.M., Saito M.A., Gladyshev V.N., Grigoriev I.V.;
RT "Niche of harmful alga Aureococcus anophagefferens revealed through
RT ecogenomics.";
RL Proc. Natl. Acad. Sci. U.S.A. 108:4352-4357(2011).
CC -!- FUNCTION: Required for 60S pre-ribosomal subunits export to the
CC cytoplasm. {ECO:0000256|RuleBase:RU365057}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|RuleBase:RU365057}.
CC -!- SIMILARITY: Belongs to the SDA1 family.
CC {ECO:0000256|RuleBase:RU365057}.
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DR EMBL; GL833134; EGB06473.1; -; Genomic_DNA.
DR RefSeq; XP_009038659.1; XM_009040411.1.
DR AlphaFoldDB; F0YE05; -.
DR EnsemblProtists; EGB06473; EGB06473; AURANDRAFT_29008.
DR GeneID; 20220652; -.
DR KEGG; aaf:AURANDRAFT_29008; -.
DR eggNOG; KOG2229; Eukaryota.
DR InParanoid; F0YE05; -.
DR OMA; AMYKTYK; -.
DR OrthoDB; 5482564at2759; -.
DR Proteomes; UP000002729; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IEA:UniProtKB-UniRule.
DR GO; GO:0000055; P:ribosomal large subunit export from nucleus; IEA:UniProtKB-UniRule.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027312; Sda1.
DR InterPro; IPR012977; SDA1_N.
DR PANTHER; PTHR12730; HSDA/SDA1-RELATED; 1.
DR PANTHER; PTHR12730:SF0; PROTEIN SDA1 HOMOLOG; 1.
DR Pfam; PF08158; SDA1_HEAT; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|RuleBase:RU365057};
KW Protein transport {ECO:0000256|RuleBase:RU365057};
KW Reference proteome {ECO:0000313|Proteomes:UP000002729};
KW Ribosome biogenesis {ECO:0000256|RuleBase:RU365057};
KW Transport {ECO:0000256|RuleBase:RU365057}.
FT DOMAIN 69..457
FT /note="SDA1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08158"
FT REGION 250..310
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 486..505
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 525..600
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 256..273
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 274..293
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 294..310
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 526..600
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 600
FT /evidence="ECO:0000313|EMBL:EGB06473.1"
SQ SEQUENCE 600 AA; 66815 MW; 513E9FAFF922905C CRC64;
MKVRQHTLPV LQNLLKRDPP AYKEEFEAIW RQYLSELEVF KLRSAEGEAA PGRLAKDGDE
KRLAELATFV SHTCKHYDFA AQRFGPQLCR LLKDRCVGLA PELRLSLVQA CVLARSKGLL
DPVELLELCF ELIRRVRDRA LRDELRTHVV NDVRRCARGG GESKGSQQAL MKKFQRCLFF
HCGDASREGS DKSAKVALDA VVDLYGRGVW TCAPTVNCVG RACVDDRSKL ACTAIHFFLG
IEQSPVLDEL DSDDEDARDA GKASDAIKKG RRDVDVHKHS KKTRKRERDT KKQLKRVKKL
ARDATDRTRG DSKPVFPAIA LLDDPHKLCE RLLARLRAQK DKFEIRVAMM DLISRVACAH
KLALLPFYSY VQRYLTAHQK DAPKLLAVFA QACHDLVPPD ELVAAARKIA DAFVSERNAP
EAMALGINAL REVAGRCPAL LDEPEMLGFV RDLAAHAKHR DRSVVVAARG WINVVREHYP
ALLHKKDRGR AHAASTREPA KYGAATAATA VEGEELLRAY ERGDLPEDFD DADDDGAGWV
DVDDDDGGAE EDGADDDDEE EEVEDDDGDD DGDDEEAGED EDDGEEDDED DGEGGWEEAS
//