ID F0YIR4_AURAN Unreviewed; 1937 AA.
AC F0YIR4;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGB04938.1};
GN ORFNames=AURANDRAFT_72385 {ECO:0000313|EMBL:EGB04938.1};
OS Aureococcus anophagefferens (Harmful bloom alga).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Pelagophyceae; Pelagomonadales;
OC Aureococcus.
OX NCBI_TaxID=44056 {ECO:0000313|Proteomes:UP000002729};
RN [1] {ECO:0000313|EMBL:EGB04938.1, ECO:0000313|Proteomes:UP000002729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP 1984 {ECO:0000313|Proteomes:UP000002729};
RX PubMed=21368207; DOI=10.1073/pnas.1016106108;
RA Gobler C.J., Berry D.L., Dyhrman S.T., Wilhelm S.W., Salamov A.,
RA Lobanov A.V., Zhang Y., Collier J.L., Wurch L.L., Kustka A.B., Dill B.D.,
RA Shah M., VerBerkmoes N.C., Kuo A., Terry A., Pangilinan J., Lindquist E.A.,
RA Lucas S., Paulsen I.T., Hattenrath-Lehmann T.K., Talmage S.C., Walker E.A.,
RA Koch F., Burson A.M., Marcoval M.A., Tang Y.Z., Lecleir G.R., Coyne K.J.,
RA Berg G.M., Bertrand E.M., Saito M.A., Gladyshev V.N., Grigoriev I.V.;
RT "Niche of harmful alga Aureococcus anophagefferens revealed through
RT ecogenomics.";
RL Proc. Natl. Acad. Sci. U.S.A. 108:4352-4357(2011).
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DR EMBL; GL833145; EGB04938.1; -; Genomic_DNA.
DR RefSeq; XP_009040293.1; XM_009042045.1.
DR EnsemblProtists; EGB04938; EGB04938; AURANDRAFT_72385.
DR GeneID; 20228686; -.
DR KEGG; aaf:AURANDRAFT_72385; -.
DR eggNOG; KOG2002; Eukaryota.
DR InParanoid; F0YIR4; -.
DR OrthoDB; 3573659at2759; -.
DR Proteomes; UP000002729; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0032991; C:protein-containing complex; IEA:UniProt.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR031101; Ctr9.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR14027; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9; 1.
DR PANTHER; PTHR14027:SF2; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG; 1.
DR Pfam; PF13432; TPR_16; 3.
DR SMART; SM00028; TPR; 7.
DR SUPFAM; SSF48452; TPR-like; 4.
DR PROSITE; PS50005; TPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002729};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 1088..1121
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 1122..1155
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 1412..1445
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 162..184
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1905..1937
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 165..179
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1937 AA; 212716 MW; 25FBCF458516240D CRC64;
MDGRVTVERL AIQNTQGHFT YFLPIMLQQL IIQTQPLDTI NPLAFYTDHP FLVAQDIDLA
PLIVDICIHR LRQLQPRRRR RIEDLRLFLL QPNLVCFLSQ HRKSAGMKEG KASMSCEIVA
ARSGDLCATL GEGDPLSDTA TARRFTAVRN LRGGVLLAPP ATTFPGNRSP VQASRGASSE
GEARTAVEHV VSYRESIPRE PNSAWKRCRG AALTFYYLVH LSQKFGNVPD EDAATTSRVE
PLGTTFAAAC TTPGESVPVC HRTEHALWKV EPSSSGSSKT LQLARWLVTL FSTKFGPFAA
IVVVVLGVLR LALSPCGKAP CPGFKLPKED EPPEFYRFPC AVEKQPPKGA DKVLPEHHSK
CAQCTFGYQM VMPKEGKCKR LALSLTYHER RDINAAPKCD ACYAEKFVKV PSTYGEIINK
LADKTNKWHQ HMWIKQLTKR AQELTAPSGL DRGPIFIFYF PGIRRYAWLA LANFPRCGLG
YVFAEHARPV DDVHDVDGAV GKQRDRASQG VAHLEGPGRR RVHLAICRSE TLFRAAPRSR
EGAHGCATEA IGDRTGCSKS FRIDYVIIYH AKRIYLARRR RVGNLRRRRA NSSLGLGLGL
GLGLGLEATF FRNTPLELCY APRPGYNPIG FLVDAPSPES SGAQDNLPAI ARTMSIIIPV
RGSSNTVEVF NDELPEDPAD VIDLLRAELA PLNTWCEFAV AYHNQGKREQ FREILLGVVD
AFDVYEMQDF YRRQPDLFAS GRLRVLNLLA ASATSNFIAE ELRKEAREAL TYILITIAWR
QKALEYIGRA DKISTSCSQT WLVKALFWIG EHHHDAHALR NSAYYADSAL RSDNGASCNA
RLAKAAVLFH ECKFSDALRL YASTLRSDPR AAGASARIGV GLCAYHLGDK DKALTALERA
LSLGTTCVEA LVAVAILRLD QESDPKIMGR KGTGLLSKRA TAGPVQVINS PGRMLSRARE
LDPTCSMALN HYGNHLFWLW QQSSLTGHAQ MGSSSITCST DPSDLLHSGT CIQLIQNGEN
KVALETKVRD VVILPGELDT WTVNLATPYR PLAKTDLHKL SIKVKEVPEI DDLASRAYHC
TAVPEIQAEA YFILGRNHHV RNEFQGALPF YVQACKLWPH FALAQFRLAQ VRAAMNDLPA
ALEAAEVALE LAPNAHEVLR LVGLLRLTQN STKSPLEVLR HAIAQNSNDT CTWLALASAL
ERHIFTDDAV HERDPSLVRK AIDAYDNAAK LKWESSSTVP FQISNNVGVL HLCLGEARPA
QSAFLSALHD FEGCSPNQGP DATLSTVNPY CFMPSVTGSD VGVQGEFWHD YWKLIDGGAW
HSSTNLCTLW IDMPIDPPFT VGERIRIGDG GATCIVSVKS MRVSAIGKPI SRENALVIQI
SEPLRMLSST KPVNLPLYRI DLSCQTLMPN SVPIYLNLAQ VHAAAGDLPR ARELARLAVA
LAPNNIRCKL LLARLAFAMR DVEQARKHTA SAVKISLGLM DGSSGAIFLG LVADSLSVAS
VMWRKLENYE EALKTLDYLK DLKISNRGFS TVYANATLSN LHFRDQIRSG RTGIGDIQPD
HRAQQLKNAA DCARSALNDD PSCAMAAQAL GAVLLESGKL DDSMLIFERV QEKLVAGSKA
SCGDSAIDRD ASCSVLDAAI NLAHSRLLAG KWLEAAANYA TCAKVLIAMS AGKMFVPCSA
QTRRADVYHW LARACHGANE AQGARRALAA AIHLQPGNLA FRCHCAILLL ESAHGLCRSS
SSPQVMSSLR SKGDYTVVLL AIARDMLLWL RNQCLQDSDS RPQPLEFKDL ISKCDDVLQK
ARQYLECIAS ELTIRLLRLS LTHVSKMKQA IVCAMLSAYS IDRSVKTCKL CNTPHSSLRL
ARIVAERHVR EAAATAAARA TAEECMAKAQ RKKEQLDSLQ ERWTIGSGSI SNDGDVAVAG
DTQGESVDGT KKGIIES
//
