ID F0YUS3_9CLOT Unreviewed; 343 AA.
AC F0YUS3;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Putative ribose ABC transporter, ribose-binding protein {ECO:0000313|EMBL:EGB94643.1};
GN ORFNames=HMPREF0240_00890 {ECO:0000313|EMBL:EGB94643.1};
OS Clostridium sp. D5.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=556261 {ECO:0000313|EMBL:EGB94643.1, ECO:0000313|Proteomes:UP000003978};
RN [1] {ECO:0000313|EMBL:EGB94643.1, ECO:0000313|Proteomes:UP000003978}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D5 {ECO:0000313|EMBL:EGB94643.1,
RC ECO:0000313|Proteomes:UP000003978};
RG The Broad Institute Genome Sequencing Platform;
RA Ward D., Earl A., Feldgarden M., Gevers D., Young S., Zeng Q., Koehrsen M.,
RA Alvarado L., Berlin A.M., Borenstein D., Chapman S.B., Chen Z., Engels R.,
RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E.R.,
RA Heiman D.I., Hepburn T.A., Howarth C., Jen D., Larson L., Mehta T.,
RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D.,
RA Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., Yandava C.,
RA Sibley C.D., White A.P., Crowley S., Surette M.G., Strauss J.C.,
RA Ambrose C.E., Allen-Vercoe E., Haas B., Nusbaum C., Birren B.;
RT "The Genome Sequence of Clostridium sp. D5.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
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DR EMBL; GL870809; EGB94643.1; -; Genomic_DNA.
DR RefSeq; WP_009002275.1; NZ_GL870809.1.
DR AlphaFoldDB; F0YUS3; -.
DR eggNOG; COG1879; Bacteria.
DR HOGENOM; CLU_037628_3_7_9; -.
DR OrthoDB; 9769193at2; -.
DR Proteomes; UP000003978; Unassembled WGS sequence.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProt.
DR CDD; cd01536; PBP1_ABC_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR46847; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR PANTHER; PTHR46847:SF1; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000003978};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..343
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5039725688"
FT DOMAIN 48..318
FT /note="Periplasmic binding protein"
FT /evidence="ECO:0000259|Pfam:PF13407"
SQ SEQUENCE 343 AA; 36882 MW; 819F3FB4E14A12E5 CRC64;
MKKKILSVLV AAVMVFSLGA CGLVKTSDDS QSSGDAGKKD GENKTLKVGY TVQSMENAYF
VSIVEGMKAA AKEKGIDLVV ADAAADASKH ISQIEDFVSQ GVDAIIISPV DQEAPADAVK
KAQDAGIPVI SLDQEVKGSD AFFGIDESEY GRLGGELAGQ WLNEKESDGT IDEIVNDKDE
IEVVVVRYDQ IPSVIKRADG LKKGLEDTYT GDKKINYVYE QNAADADTGY NLSETALTSN
PKVSMFICIN DSSALGVYES CLTHKEHTPD NTCIIGLDAL PEALKLISQD TMYKGTVDIK
PAEKGADVLD LVQDVIKNGP KSEMIVYDMS QVTKENIGDY DIK
//
