ID   F0YWF5_9CLOT            Unreviewed;       654 AA.
AC   F0YWF5;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   03-MAY-2011, sequence version 1.
DT   27-MAR-2024, entry version 43.
DE   SubName: Full=Phage-related integrase {ECO:0000313|EMBL:EGB93993.1};
GN   ORFNames=HMPREF0240_00230 {ECO:0000313|EMBL:EGB93993.1};
OS   Clostridium sp. D5.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=556261 {ECO:0000313|EMBL:EGB93993.1, ECO:0000313|Proteomes:UP000003978};
RN   [1] {ECO:0000313|EMBL:EGB93993.1, ECO:0000313|Proteomes:UP000003978}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=D5 {ECO:0000313|EMBL:EGB93993.1,
RC   ECO:0000313|Proteomes:UP000003978};
RG   The Broad Institute Genome Sequencing Platform;
RA   Ward D., Earl A., Feldgarden M., Gevers D., Young S., Zeng Q., Koehrsen M.,
RA   Alvarado L., Berlin A.M., Borenstein D., Chapman S.B., Chen Z., Engels R.,
RA   Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E.R.,
RA   Heiman D.I., Hepburn T.A., Howarth C., Jen D., Larson L., Mehta T.,
RA   Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D.,
RA   Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., Yandava C.,
RA   Sibley C.D., White A.P., Crowley S., Surette M.G., Strauss J.C.,
RA   Ambrose C.E., Allen-Vercoe E., Haas B., Nusbaum C., Birren B.;
RT   "The Genome Sequence of Clostridium sp. D5.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; GL870809; EGB93993.1; -; Genomic_DNA.
DR   AlphaFoldDB; F0YWF5; -.
DR   eggNOG; COG0582; Bacteria.
DR   HOGENOM; CLU_431323_0_0_9; -.
DR   Proteomes; UP000003978; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   Gene3D; 1.10.150.130; -; 1.
DR   Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR   InterPro; IPR011010; DNA_brk_join_enz.
DR   InterPro; IPR013762; Integrase-like_cat_sf.
DR   InterPro; IPR002104; Integrase_catalytic.
DR   InterPro; IPR010998; Integrase_recombinase_N.
DR   PANTHER; PTHR30349; PHAGE INTEGRASE-RELATED; 1.
DR   PANTHER; PTHR30349:SF87; PROPHAGE INTEGRASE INTD-RELATED; 1.
DR   Pfam; PF00589; Phage_integrase; 1.
DR   SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR   PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE   4: Predicted;
KW   DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000003978}.
FT   DOMAIN          457..640
FT                   /note="Tyr recombinase"
FT                   /evidence="ECO:0000259|PROSITE:PS51898"
SQ   SEQUENCE   654 AA;  75706 MW;  DEDAB6195F31AAF9 CRC64;
     MRIKNICNNE ITIKPKGCDF MNYNETVDKV MVLLKEKGVC FSSQQSHRDC YESLRLFMEQ
     RNEGYSDAIR ESWLAYIKNE LHRQRCAVWL QYAYQLEEMD STGIISDRRL YLNRSNYDKL
     PTLWRKDLDV YLDDCSSRYT VRTLQLIRIY CSEGLLFLDD MGVHDITDVI YDAAIKLIGT
     KMYCCDDTKA MILNNTARMI RFYGEKGLCP MNYSFVFNCQ IYPHIGEVSG FSDQNRMVLD
     KITDVTMSAD EFYKSVTPFI ELLESHGYVG TTLKLARHAL TALYLFLDMH FFGFHQDIMW
     IWFAEISRTI GHSWLHWRRV LKFYEDYTLS GDIHPDGKYR YNPVVFDELP SWCKEAISGL
     LDQKRREFRD AGTIKSYRCS CTRFCRFLVD HGFESFNQLS PTVIKEFSSH DEHTTFHGRA
     GCFVIVRAFL RYLDEKGYTD NHGLDACLMS GTAPQDKIID VLSDEQLQRI HAFRTEHNEP
     IELRDIAIVL LGLRTGLRAC DILALRFQDI DWKNRHISIV MKKTKMQITL PMPVGAGNAI
     YSYITSGRPK ASTEYIFVRS KAPYGKLTGK VCTKALYRIL PERKDVKSGG FHVTRRTFAT
     NLLRNHAGID DVMDTLGHRD PTSVMKYLLL DVERSRKCGL SLDSAGILME GGLA
//