ID F0YXF7_9CLOT Unreviewed; 570 AA.
AC F0YXF7;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Ferredoxin 2 {ECO:0000313|EMBL:EGB93645.1};
GN ORFNames=HMPREF0240_01522 {ECO:0000313|EMBL:EGB93645.1};
OS Clostridium sp. D5.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=556261 {ECO:0000313|EMBL:EGB93645.1, ECO:0000313|Proteomes:UP000003978};
RN [1] {ECO:0000313|EMBL:EGB93645.1, ECO:0000313|Proteomes:UP000003978}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D5 {ECO:0000313|EMBL:EGB93645.1,
RC ECO:0000313|Proteomes:UP000003978};
RG The Broad Institute Genome Sequencing Platform;
RA Ward D., Earl A., Feldgarden M., Gevers D., Young S., Zeng Q., Koehrsen M.,
RA Alvarado L., Berlin A.M., Borenstein D., Chapman S.B., Chen Z., Engels R.,
RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E.R.,
RA Heiman D.I., Hepburn T.A., Howarth C., Jen D., Larson L., Mehta T.,
RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D.,
RA Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., Yandava C.,
RA Sibley C.D., White A.P., Crowley S., Surette M.G., Strauss J.C.,
RA Ambrose C.E., Allen-Vercoe E., Haas B., Nusbaum C., Birren B.;
RT "The Genome Sequence of Clostridium sp. D5.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; GL870810; EGB93645.1; -; Genomic_DNA.
DR RefSeq; WP_009002897.1; NZ_GL870810.1.
DR AlphaFoldDB; F0YXF7; -.
DR eggNOG; COG2221; Bacteria.
DR eggNOG; COG3290; Bacteria.
DR eggNOG; COG4624; Bacteria.
DR HOGENOM; CLU_027268_0_0_9; -.
DR OrthoDB; 9798098at2; -.
DR Proteomes; UP000003978; Unassembled WGS sequence.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.20; -; 1.
DR Gene3D; 1.10.15.40; Electron transport complex subunit B, putative Fe-S cluster; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR007202; 4Fe-4S_dom.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR InterPro; IPR009016; Fe_hydrogenase.
DR InterPro; IPR004108; Fe_hydrogenase_lsu_C.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR11615:SF368; HYDROGENASE-RELATED; 1.
DR PANTHER; PTHR11615; NITRATE, FORMATE, IRON DEHYDROGENASE; 1.
DR Pfam; PF02906; Fe_hyd_lg_C; 1.
DR Pfam; PF12838; Fer4_7; 1.
DR Pfam; PF04060; FeS; 1.
DR Pfam; PF00989; PAS; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
DR SUPFAM; SSF53920; Fe-only hydrogenase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS51656; 4FE4S; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 2.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000003978}.
FT DOMAIN 1..30
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT DOMAIN 31..60
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT DOMAIN 355..416
FT /note="4Fe-4S"
FT /evidence="ECO:0000259|PROSITE:PS51656"
FT DOMAIN 407..477
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
SQ SEQUENCE 570 AA; 64331 MW; AD0A5104C5D89379 CRC64;
MRVIDFKDAK CRHCYKCVRY CMVKAISVQN EQAHILKDHC INCGRCMEIC PQNAKTFASD
MDRVKGYLRQ GFKTIISIAP SYLGVLEFER PGQVVDALQR LGFAEVRETA EGAAMVTNEY
KKIIREKKMP NIITTCCPSV NDLVEKYYPD CVDLLAPVVS PMVAHGRYIK KLYGDDVKVV
FLGPCIAKKQ EAIGDDRVFG AIDAILTFEE LAIWLEEAGI DIYACEDKPM GNPDPKVNRM
YPISGGVIQS VVAEEDADIY HKVYVDGLAN CMEMLECLQR GELDHCFIEA NVCEGGCAKG
PASARWNTSY VKAKVKIENE VSYKAARDLP DMNTQELAKE FADNHLEDRI PTDPEIRDIL
KSTGKYSEED ELNCGACGYP TCRDKAIAVY QNKAELSMCM PYALTQAESM SNVVMDVTPN
MIFIIDSSMK IRECNKKAQD LLGVGRDEAV QRYIFEFMEA EDIEETLRTR EPVIHKKIQL
ENGRMTAEET IVYIENLDSV LVTFQDVTRE EKIKEQHYNL KVETVEMAQK VIEKQMMVAQ
EIAGLLGETT AETKVTLTKL RDSILNEGEE
//
