GenomeNet

Database: UniProt
Entry: F1MSY8_BOVIN
LinkDB: F1MSY8_BOVIN
Original site: F1MSY8_BOVIN 
ID   F1MSY8_BOVIN            Unreviewed;       306 AA.
AC   F1MSY8;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   10-APR-2019, sequence version 3.
DT   24-JAN-2024, entry version 59.
DE   SubName: Full=TCR gamma alternate reading frame protein {ECO:0000313|Ensembl:ENSBTAP00000050899.3};
GN   Name=TARP {ECO:0000313|Ensembl:ENSBTAP00000050899.3};
OS   Bos taurus (Bovine).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
OX   NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000050899.3, ECO:0000313|Proteomes:UP000009136};
RN   [1] {ECO:0000313|Ensembl:ENSBTAP00000050899.3, ECO:0000313|Proteomes:UP000009136}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000050899.3,
RC   ECO:0000313|Proteomes:UP000009136};
RA   Rosen B.D., Bickhart D.M., Koren S., Schnabel R.D., Hall R., Zimin A.,
RA   Dreischer C., Schultheiss S., Schroeder S.G., Elsik C.G., Couldrey C.,
RA   Liu G.E., Van Tassell C.P., Phillippy A.M., Smith T.P.L., Medrano J.F.;
RT   "ARS-UCD1.2.";
RL   Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSBTAP00000050899.3}
RP   IDENTIFICATION.
RC   STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000050899.3};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   AlphaFoldDB; F1MSY8; -.
DR   Ensembl; ENSBTAT00000056695.3; ENSBTAP00000050899.3; ENSBTAG00000036154.4.
DR   VEuPathDB; HostDB:ENSBTAG00000036154; -.
DR   eggNOG; ENOG502SQHK; Eukaryota.
DR   GeneTree; ENSGT00940000153143; -.
DR   HOGENOM; CLU_077975_3_2_1; -.
DR   TreeFam; TF337987; -.
DR   Proteomes; UP000009136; Chromosome 4.
DR   Bgee; ENSBTAG00000036154; Expressed in thymus and 70 other cell types or tissues.
DR   ExpressionAtlas; F1MSY8; baseline and differential.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 2.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR003597; Ig_C1-set.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR013106; Ig_V-set.
DR   PANTHER; PTHR19256:SF60; T CELL RECEPTOR GAMMA, CONSTANT 3-RELATED; 1.
DR   PANTHER; PTHR19256; T-CELL RECEPTOR GAMMA CHAIN; 1.
DR   Pfam; PF07654; C1-set; 1.
DR   Pfam; PF07686; V-set; 1.
DR   SMART; SM00409; IG; 1.
DR   SMART; SM00407; IGc1; 1.
DR   SUPFAM; SSF48726; Immunoglobulin; 2.
DR   PROSITE; PS50835; IG_LIKE; 1.
PE   4: Predicted;
KW   Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009136};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        278..300
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          116..211
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   REGION          222..244
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        226..240
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   306 AA;  34602 MW;  9C5819A53C609463 CRC64;
     MQVSSDLMLI TSNTGETASF PCDLTQGATY IHLYKHEEGT APRRLLYYDS YNSKAVLESG
     ISGTKYHVYK GTGRRYTFAI LNLQASDSGI YYCAIWDKHV AKLIVTERNL EADTSPKPTV
     FLPSIAEINH DNAGTYLCLL EKFFPDVITV SWRAKNDKRA LPSQQGNTMK TKDTYMKFSW
     LTVTENSMDK QHVCVVKHKK NIGGIDQEII FPSIKEVVTS LVPTTEPPTT KPPTTEPPTT
     EPPNDCLTDE SSKFLYRFIF MSCFSTLQLQ LMNTSTAYYT YLLLLFLSTV YFVVIISCVF
     RRTGVC
//
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