ID F1QE10_DANRE Unreviewed; 625 AA.
AC F1QE10; A0A8M3B3W6;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 2.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=Si:dkey-106g10.7 {ECO:0000313|Ensembl:ENSDARP00000111219};
GN Name=zfta {ECO:0000313|ZFIN:ZDB-GENE-160728-46};
GN Synonyms=si:dkey-106g10.7 {ECO:0000313|RefSeq:XP_009301275.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000111219};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000111219}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000111219};
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000111219, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000111219};
RX PubMed=23594743; DOI=10.1038/nature12111;
RG Genome Reference Consortium Zebrafish;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Eliott D.,
RA Threadgold G., Harden G., Ware D., Begum S., Mortimore B., Mortimer B.,
RA Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M.,
RA Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M.,
RA Glithero R., Howden P., Barker N., Lloyd C., Stevens C., Harley J.,
RA Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D.,
RA Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K.,
RA Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R.,
RA Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M.,
RA Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M.,
RA Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M.,
RA Woodmansey R., Clark G., Cooper J., Cooper J., Tromans A., Grafham D.,
RA Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J.,
RA Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I.,
RA Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M.,
RA Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M.,
RA Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G., Osoegawa K., Zhu B.,
RA Rapp A., Widaa S., Langford C., Yang F., Schuster S.C., Carter N.P.,
RA Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R.,
RA Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I.,
RA Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H.,
RA Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [3] {ECO:0000313|RefSeq:XP_009301275.1}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|RefSeq:XP_009301275.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; CT030012; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_009301275.1; XM_009303000.3.
DR Ensembl; ENSDART00000128504; ENSDARP00000111219; ENSDARG00000088036.
DR Ensembl; ENSDART00000128504.4; ENSDARP00000111219.2; ENSDARG00000088036.4.
DR GeneID; 793997; -.
DR AGR; ZFIN:ZDB-GENE-160728-46; -.
DR CTD; 65998; -.
DR ZFIN; ZDB-GENE-160728-46; zfta.
DR eggNOG; ENOG502QTI3; Eukaryota.
DR HOGENOM; CLU_035783_0_0_1; -.
DR OrthoDB; 5351621at2759; -.
DR Proteomes; UP000000437; Chromosome 7.
DR Bgee; ENSDARG00000088036; Expressed in camera-type eye and 16 other cell types or tissues.
DR InterPro; IPR040647; SPIN-DOC_Znf-C2H2.
DR PANTHER; PTHR34589; SIMILAR TO RIKEN CDNA 2700081O15; 1.
DR PANTHER; PTHR34589:SF2; ZINC FINGER TRANSLOCATION-ASSOCIATED PROTEIN; 1.
DR Pfam; PF18658; zf-C2H2_12; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 108..170
FT /note="SPIN-DOC-like zinc-finger"
FT /evidence="ECO:0000259|Pfam:PF18658"
FT DOMAIN 254..317
FT /note="SPIN-DOC-like zinc-finger"
FT /evidence="ECO:0000259|Pfam:PF18658"
FT DOMAIN 394..456
FT /note="SPIN-DOC-like zinc-finger"
FT /evidence="ECO:0000259|Pfam:PF18658"
FT DOMAIN 524..586
FT /note="SPIN-DOC-like zinc-finger"
FT /evidence="ECO:0000259|Pfam:PF18658"
FT REGION 1..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 203..238
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 458..521
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..31
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 209..230
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 471..485
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 492..509
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 625 AA; 70795 MW; 2AA0CE07414CD755 CRC64;
MDEAESVHKA EQTESRSLII KAEEEEATSQ RGLLGDHSAG EEEVTNGLTS DAIQDGPVSS
VCSPGTSYWC VSESTDSPFL LNPLPGPSTQ ETPPLKNTPG RDHRRYYHEY WRSEYLMDFD
PQRQGMICMV CGSSLATLKL STIKRHIKQK HPYSLLWTES DKDVIRSGWE NHLNRENSQQ
RPLCTDPDVP PEAEEILDVD RHSTDKPIGA SSPDPQAQAG LSRVSPSPPA PSVQELSPGP
TAQVMERYLN DSLHAWFRQE FLMEYQAEQG RLVCMVCSCL LPSLHLDHIK SHMLELHPNS
LLYSAEEKHA ILQTWAKMHS EESHPLQPQI KLEQHTKEIN LDGAASFFPP IMDPVQGNLE
SYTRGDENPS DTVQRSQSLP YYPRKRRLKY GSPWRLRLDY LVAYGPPENP LCYCMVCSEH
LPVPRVTNFR KHIQECHPET SSLSRSERDA VVNAWMKEEN IDRATPKEDD PQSVPVTTEP
QASPVKSIEQ GGEAEDNSTQ ITLQTQTAGR HRHYPGKDQR RNYQPRWKMD FLMDYDCRKH
GLICMVCGAT LATLKVSTIK RHILQVHPHS LDYSPEERQL VLLCYNQISA HFHSDDCFSG
SNHGHKENAN GNNYVQGECT SSQST
//
