ID F1R7N4_DANRE Unreviewed; 1329 AA.
AC F1R7N4; A0A8M2B6K0;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 77.
DE SubName: Full=Zinc finger MYM-type protein 4 isoform X1 {ECO:0000313|RefSeq:XP_005159754.1};
DE SubName: Full=Zinc finger, MYM-type 4 {ECO:0000313|Ensembl:ENSDARP00000125993};
GN Name=zmym4.1 {ECO:0000313|ZFIN:ZDB-GENE-030131-5459};
GN Synonyms=im:7136725 {ECO:0000313|RefSeq:XP_005159754.1},
GN si:ch211-173p18.1 {ECO:0000313|RefSeq:XP_005159754.1}, wu:fd19d11
GN {ECO:0000313|RefSeq:XP_005159754.1}, zmym4
GN {ECO:0000313|RefSeq:XP_005159754.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000125993};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000125993}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000125993};
RG Ensembl;
RL Submitted (MAY-2012) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000125993, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000125993};
RX PubMed=23594743; DOI=10.1038/nature12111;
RG Genome Reference Consortium Zebrafish;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Eliott D.,
RA Threadgold G., Harden G., Ware D., Begum S., Mortimore B., Mortimer B.,
RA Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M.,
RA Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M.,
RA Glithero R., Howden P., Barker N., Lloyd C., Stevens C., Harley J.,
RA Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D.,
RA Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K.,
RA Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R.,
RA Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M.,
RA Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M.,
RA Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M.,
RA Woodmansey R., Clark G., Cooper J., Cooper J., Tromans A., Grafham D.,
RA Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J.,
RA Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I.,
RA Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M.,
RA Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M.,
RA Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G., Osoegawa K., Zhu B.,
RA Rapp A., Widaa S., Langford C., Yang F., Schuster S.C., Carter N.P.,
RA Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R.,
RA Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I.,
RA Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H.,
RA Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [3] {ECO:0000313|Ensembl:ENSDARP00000148535}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000148535};
RG Ensembl;
RL Submitted (APR-2018) to UniProtKB.
RN [4] {ECO:0000313|RefSeq:XP_005159754.1}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|RefSeq:XP_005159754.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; BX510986; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CR749172; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_005159754.1; XM_005159697.4.
DR Ensembl; ENSDART00000151365.3; ENSDARP00000125993.1; ENSDARG00000035823.9.
DR Ensembl; ENSDART00000191109.1; ENSDARP00000148535.1; ENSDARG00000035823.9.
DR GeneID; 327248; -.
DR AGR; ZFIN:ZDB-GENE-030131-5459; -.
DR CTD; 327248; -.
DR ZFIN; ZDB-GENE-030131-5459; zmym4.1.
DR OrthoDB; 5399298at2759; -.
DR Proteomes; UP000000437; Chromosome 19.
DR Bgee; ENSDARG00000035823; Expressed in mature ovarian follicle and 21 other cell types or tissues.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR021893; DUF3504.
DR InterPro; IPR011017; TRASH_dom.
DR InterPro; IPR010507; Znf_MYM.
DR PANTHER; PTHR45736; ZINC FINGER MYM-TYPE PROTEIN; 1.
DR PANTHER; PTHR45736:SF5; ZINC FINGER MYM-TYPE PROTEIN 4; 1.
DR Pfam; PF12012; DUF3504; 1.
DR Pfam; PF06467; zf-FCS; 2.
DR SMART; SM00746; TRASH; 9.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:F1R7N4};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 202..235
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 246..286
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 289..322
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 329..368
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 422..458
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 506..542
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 548..583
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 595..630
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 636..671
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 39..112
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 470..496
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 679..707
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 746..768
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 917..953
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 968..1008
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 46..67
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 76..91
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 93..107
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 693..707
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 746..762
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 979..993
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1329 AA; 147750 MW; E7C5EBBFBDAECAD7 CRC64;
MSTEDFIGGT AESGKMDTTE TDANEPFIEN MLMECHQVDE EEMEEEHESR TTKNQKEVEE
PECSAEFVAA KVEDFTNEMS RPEDADIKME RTEPSALQTQ SAVKPDMKPQ QLSVDLPMKV
KDEPMDEEYE KASVSLHTEG DIKDEPDTAA DNQTGAIKIS AVFSVGGTPA PIAQVSVSAK
PAPVPTLSLR PLAPANPVGV VCTGCNKILL KGQTAFQRKG CPKLFCSPQC LCSNSNVVVK
MPPKKCHFCL KDITDSKDVI SAPVDMAGNL KEFCSQKCIS LLNFKCSVCQ KAGTTFTHKV
NLMDSVHILC SDDCFNQFRT SNKLNGNSCM NCGGICYGTD APCQSLQIEG IVMKFCKPSC
LTAFKKKSLK PVACKICRTL HPVAEMLECM NAEGIREIFC SAACVTANKV QTVSSSGAPV
ECNSCKQKLV PQYHLAMSDS SIQNFCSFSC VVSYQESFGK KPNYQVNTVT STTNASTPKP
ASSESSSSTK TSTSKSQVQN VTKIPCSQCL NSFFHKPELL DFKRKMYAFC GTACVEEFKQ
INNVMARCEY CKIDKIIKEV KRINKIDRSF CSEGCRLLYK HDLVKRWGKK HCRNCLYCSG
SAQTVVSAII NNVEEEFCGT MCLSLHTSLL RKEIKCSMCR QAKKMTETVK WVGEIKHFCS
LQCLMFFCSL QGTTGTVKPQ IKPQPTQGTS PAPSPAPQST VNLVSPTTKE TTPVIANVIS
LVNASNGQPT VLGNSVLQAS VPAAATKSSG NTASTQTDSV KPSAPPPRIL KNKALLCKPL
SQNKGTSCKP NVCDMDSQTE GPAVIVLPVP VPIYVPVPMS LYTQYTPKSV GLPLPVPVPL
FFPTTLDSAE SIVQTIQEIK EKIPDDPLEA DLIMMAEMVA EDAEKEKRIS STDQPVHIME
DLDLEALSSN LSWEEDSVSS AQTWDQAPEP ERFLPPPSRS ATVTPVSSTA EEPQMDLEAD
FPIESIELFR EQTPNKTTGK RKSRKRARDG FPQKKRARKT AAELPAKSAP ENLSNISKLQ
HEYGVTAWRD WVRWRNAQPN METPKFGSRS MTLKEDLLKC CTAEISYGLC KFITEVRRPN
GEKYSPDSIY YLCLGIQQYL FENSRMENIF ADVFYTKFCQ EMTNILRDWR PTVLPSGYIH
SRVEEEYLWD CKQLGAFSPG VLLNTLIYFF TKYFNYRTAE QHRLLSFGHI VRCSRSKGNT
KVACLRFYPP KDEADGVPAK RRKEEGEEED ETVYEIKENS DNPLRCPVRL YEFYLSKCSP
SVRQRTTDFY LSPERSCVPN SPMWFSISAL SDEALNSMLT RILTVRELHL DTEKTPADNE
SDSDSDFSP
//
