ID F1SB28_PIG Unreviewed; 2368 AA.
AC F1SB28;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2019, sequence version 4.
DT 27-MAR-2024, entry version 78.
DE SubName: Full=AT-rich interaction domain 1B {ECO:0000313|Ensembl:ENSSSCP00000004391.4};
GN Name=ARID1B {ECO:0000313|Ensembl:ENSSSCP00000004391.4,
GN ECO:0000313|VGNC:VGNC:85506};
OS Sus scrofa (Pig).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
OX NCBI_TaxID=9823 {ECO:0000313|Ensembl:ENSSSCP00000004391.4, ECO:0000313|Proteomes:UP000008227};
RN [1] {ECO:0000313|Ensembl:ENSSSCP00000004391.4, ECO:0000313|Proteomes:UP000008227}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Duroc {ECO:0000313|Ensembl:ENSSSCP00000004391.4,
RC ECO:0000313|Proteomes:UP000008227};
RG Porcine genome sequencing project;
RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSSSCP00000004391.4}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR PeptideAtlas; F1SB28; -.
DR Ensembl; ENSSSCT00000004493.5; ENSSSCP00000004391.4; ENSSSCG00000004064.5.
DR VGNC; VGNC:85506; ARID1B.
DR GeneTree; ENSGT00940000155634; -.
DR HOGENOM; CLU_000974_1_0_1; -.
DR TreeFam; TF320364; -.
DR Proteomes; UP000008227; Chromosome 1.
DR Bgee; ENSSSCG00000004064; Expressed in uterus and 44 other cell types or tissues.
DR ExpressionAtlas; F1SB28; baseline and differential.
DR GO; GO:0035060; C:brahma complex; IEA:InterPro.
DR GO; GO:0016514; C:SWI/SNF complex; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR CDD; cd16877; ARID_ARID1B; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR InterPro; IPR038040; ARID_ARID1B.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR021906; BAF250/Osa.
DR InterPro; IPR033388; BAF250_C.
DR PANTHER; PTHR12656:SF11; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1B; 1.
DR PANTHER; PTHR12656; BRG-1 ASSOCIATED FACTOR 250 BAF250; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF12031; BAF250_C; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR PROSITE; PS51011; ARID; 1.
PE 1: Evidence at protein level;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Proteomics identification {ECO:0007829|PeptideAtlas:F1SB28};
KW Reference proteome {ECO:0000313|Proteomes:UP000008227}.
FT DOMAIN 1185..1276
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT REGION 1..41
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 80..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 144..293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 310..408
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 478..539
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 569..741
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 755..981
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1021..1177
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1279..1442
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1454..1488
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1524..1692
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1831..1902
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1953..1990
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 82..96
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 154..178
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 179..212
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 331..369
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 479..504
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 514..529
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 573..587
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 647..678
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 690..714
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 770..801
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 816..834
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 844..860
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 870..893
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 901..941
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 949..963
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1028..1042
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1052..1074
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1081..1132
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1146..1160
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1161..1177
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1291..1323
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1339..1381
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1412..1442
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1568..1593
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1626..1655
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1662..1688
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1845..1872
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1974..1990
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2368 AA; 249144 MW; 55C4686CA03D64DD CRC64;
MAARAAAAAR ARAGSGERRA PPGPRPALGA RDLEAGARGA AAAAAAPGPM LGGGGDGGGL
NNVHHHPLHP RHELNMAHNA SAAAAAASTN SAKSGGSEAA LKEGGSAAAL SSSSSAAASS
SSSSLGPGSA METGLLPNHK LKTVGEAPAA PPHQQHHHHH HAHHHHHHAH HLHHHHHALQ
QQLNQFQQQQ QQQQQQQQHP ISNNNSLSGA GGGTAQPGPD MEQPQHGGAK DSAAGSQADP
PGQPLLSKPG DEDDAPPKMG EPAGGRYEQP GLGALGAQPP PVAVPGGGSS GGGPAAVSEF
NNYYGSAAPA SGGPGGRAGP CFDQHGGQQS PGMGMMHSAS ATAGAPNSMD PLQNSHEGYP
NSQYNHYPGY SRPSAGGGGG GGGGGGGGGG GGGGGGGGSG GGGGGGGAGA GAVAAAAAAA
AAAAGGGGGG YGGSSSGYGV LSSPRQQGGG MMMGPGGGGA ASLSKAAAGA AAGGFQRFAG
QNQHPSGATP TLNQLLTSPS PMMRSYGGSY PDYSSPSAPP PPPPPSQPQS QAAAAGAAAG
GQQAAAGMGL GKDMGAQYAA ASPAWAAAQQ RSHPAMSPGT PGPTMGRSQG SPMDPMVMKR
PQLYGMGGNP HSQPQQSSPY PAGSYGPPGP QRYPIGIQGR TPGAMGGMQY PQQQMPPQYG
QQGVSGYCQQ GQQPYYNQQP QPPHLPPQAQ YLPSQSQQRY QPQQDMSQEG YGTRSQPPLA
PGKPNHEDLN LIQQERPSSL PVEVLTSEDT AFGLKDLSGS IDDLPTGTEA ALSSAVSASG
STSSQGDQSN PAQSPFSPHA SPHLSSIPGG PSPSPVGSPV GSNQSRSGPI SPASIPGSQM
PPQPPGSQSE SSSHPALSQS PMPQERGFMA GTQRNPQMSQ YGAQQTGPSM SPHPSPGGQM
HPGISSFQQS NSSGTYGPQM SQYGPQGNYS RPPTYSGVPS ASYSGPGPGM GINANNQMHG
QGPSQPCGAL PLGRMPSAGM QNRPFPGNMS SMTPSSPGMS QQGGPGMGPP MPTVNRKAQE
AAAAVMQAAA NSAQSRPPYI RSPAYPSQSG AGGRPMFSSQ HPNYGNSQAP MMHQPDQYGQ
GAFPGMNQSG LMASSSPYSQ PMNNSSGLIN TQAPPYSMTP NMVNSSTASM GLADMMSPGE
SKVPLPLKAD GKEEGAAQPE SKSKKSSSST TTGEKITKVY ELGNEPERKL WVDRYLSFME
ERGSPVSSLP AVGKKPLDLF RLYVCVKEIG GLAQVNKNKK WRELATTLNV GTSSSAASSL
KKQYIQYLFA FECKIERGEE PPPEVFSTGD TKKQPKLQPP SPANSGSLQG PQTPQSTGSN
SMAEVPGDLK PPTPASTPHG QMTPMQGGRS STVSVHDPFS DASDASFPKR NSMTPSAPYQ
QGMSMPDVMG RMPYEPNKDP FGGMRKVPGS SEPFMTQGQM PTSSMQDMYN QSPSGAMSSL
GMGQRQQFPY GASYDRRHEP YGQQYPGQGP PSGQPPYGGH QPGLYPQQTN YKRHMDGMYG
PPAKRHEGDV YNMQYGNQQQ EMYNQYSGSY SGPDRRPIQG QYPYPYNRER MQGPGQIQPH
GIPPQIMGGP MQSSSSEGPQ QSMWATRNDM PYPYQNRQGP GGPAQAPPYP GMNRTDDMMV
PDQRINHESQ WPSHVSQRQP YMSSSASMQP ITRPPQSSYQ TPPSLPNHIS RAPSPASFQR
SLESRLSPSK SPFLPAMKMQ KAMPTVPTAQ VAGPPPQPPP IRREITFPPG SVEASQPVLK
QRRKITSKDI VTPEAWRVMM SLKSGLLAES TWALDTINIL LYDDSTVATF NLSQLSGFLE
LLVEYFRKCL IDIFGILMEY EVGDPSQKAL DHNAVKRDDS QSLADESGKE EEDAECMDEE
EDEEEDEEEG GGKPEPEDRS GTALASPDAT ADPKEKPRQA SKFDKLPIKI VKKNNLFVVD
RSDKLGRVQE FSSGLLHWQL GGGDTTEHIQ THFESKMEIP PRRRPPPPLS STGRKKDQEG
KADSEEQQEK SIIATIDDVL SARPGALPED ANPGTQAESS KFPFGIHQAK SHRNIKLLED
EPRSRDEAPL CTIAHWQDSL AKRCICVSNI VRSLSFVPGN DAEMSKHPGL VLILGKLILL
HHEHPERKRA PQTYEKEEDE DKGVACSKDE WWWDCLEVLR DNTLVTLANI SGQLDLSAYT
ESICLPILDG LLHWMVCPSA EAQDPFPTVG PNSVLSPQRL VLETLCKLSI QDNNVDLILA
TPPFSRQEKF YATLVRYVGD RKNPVCREMS MALLSNLAQG DALAARAIAV QKGSIGNLIS
FLEDGVTMAQ YQQSQHNLMH MQPPPLEPPS VDMMCRAAKA LLAMARVDEN RSEFLLHEGR
LLDISISAVL NSLVASVICD VLFQIGQL
//
