ID F1SJU6_PIG Unreviewed; 239 AA.
AC F1SJU6;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=Retrotransposon Gag like 6 {ECO:0000313|Ensembl:ENSSSCP00000000023.1};
DE SubName: Full=Retrotransposon Gag-like protein 6 {ECO:0000313|EMBL:HDB04455.1};
GN Name=RTL6 {ECO:0000313|Ensembl:ENSSSCP00000000023.1,
GN ECO:0000313|VGNC:VGNC:92499};
OS Sus scrofa (Pig).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
OX NCBI_TaxID=9823 {ECO:0000313|Ensembl:ENSSSCP00000000023.1, ECO:0000313|Proteomes:UP000008227};
RN [1] {ECO:0000313|Ensembl:ENSSSCP00000000023.1, ECO:0000313|Proteomes:UP000008227}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Duroc {ECO:0000313|Ensembl:ENSSSCP00000000023.1,
RC ECO:0000313|Proteomes:UP000008227};
RG Porcine genome sequencing project;
RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:HDB04455.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=30723633; DOI=.7717/peerj.6374;
RA Gilbert D.G.;
RT "Genes of the pig, Sus scrofa, reconstructed with EvidentialGene.";
RL PeerJ 7:E6374-E6374(2019).
RN [3] {ECO:0000313|Ensembl:ENSSSCP00000000023.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; DQIR01148978; HDB04455.1; -; Transcribed_RNA.
DR RefSeq; XP_005663798.1; XM_005663741.2.
DR STRING; 9823.ENSSSCP00000000023; -.
DR PaxDb; 9823-ENSSSCP00000000023; -.
DR Ensembl; ENSSSCT00000000023.4; ENSSSCP00000000023.1; ENSSSCG00000000022.4.
DR GeneID; 100520193; -.
DR KEGG; ssc:100520193; -.
DR CTD; 84247; -.
DR VGNC; VGNC:92499; RTL6.
DR eggNOG; ENOG502R33E; Eukaryota.
DR GeneTree; ENSGT00940000162853; -.
DR HOGENOM; CLU_101832_0_0_1; -.
DR OMA; TCASNRA; -.
DR OrthoDB; 5203294at2759; -.
DR TreeFam; TF337113; -.
DR Proteomes; UP000008227; Chromosome 5.
DR Bgee; ENSSSCG00000000022; Expressed in granulosa cell and 45 other cell types or tissues.
DR InterPro; IPR032549; DUF4939.
DR InterPro; IPR032567; LDOC1-rel.
DR PANTHER; PTHR15503; LDOC1 RELATED; 1.
DR PANTHER; PTHR15503:SF30; RETROTRANSPOSON GAG-LIKE PROTEIN 6; 1.
DR Pfam; PF16297; DUF4939; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000008227}.
FT DOMAIN 96..177
FT /note="DUF4939"
FT /evidence="ECO:0000259|Pfam:PF16297"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 86..105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 217..239
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 29..63
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 239 AA; 26043 MW; 65DCF6D14FA06F93 CRC64;
MVQPQTSKAE TPASAASTNA QMDDVIDTLT SLRLTNSALR REASTLRAEK ANLTNMLESV
MAELTLLRTR ARIPGALQIT PPISAIASSG TRPMTTPPTS LPEPFSGDPG QLAGFLMQMD
RFMIFQASRF PGEAERVAFL VSRLTGEAEK WAIPHMQPDS PLRNNYQGFL AELRRTYKSP
LRHARRAQIR KTSASNRAVR ERQTLCRQLA ATGAAPCPVH PASNGTSPAP ALPTRARNL
//
