ID F1Z866_9SPHN Unreviewed; 792 AA.
AC F1Z866;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE SubName: Full=TonB-dependent receptor {ECO:0000313|EMBL:EGD59159.1};
GN ORFNames=Y88_1221 {ECO:0000313|EMBL:EGD59159.1};
OS Novosphingobium nitrogenifigens DSM 19370.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=983920 {ECO:0000313|EMBL:EGD59159.1, ECO:0000313|Proteomes:UP000004728};
RN [1] {ECO:0000313|EMBL:EGD59159.1, ECO:0000313|Proteomes:UP000004728}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19370 {ECO:0000313|EMBL:EGD59159.1,
RC ECO:0000313|Proteomes:UP000004728};
RX PubMed=22156397; DOI=10.1128/JB.06381-11;
RA Strabala T.J., Macdonald L., Liu V., Smit A.M.;
RT "Draft Genome Sequence of Novosphingobium nitrogenifigens Y88T.";
RL J. Bacteriol. 194:201-201(2012).
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC {ECO:0000256|RuleBase:RU003357}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGD59159.1}.
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DR EMBL; AEWJ01000037; EGD59159.1; -; Genomic_DNA.
DR RefSeq; WP_008065453.1; NZ_GL876926.1.
DR AlphaFoldDB; F1Z866; -.
DR STRING; 983920.Y88_1221; -.
DR eggNOG; COG4773; Bacteria.
DR HOGENOM; CLU_008287_15_0_5; -.
DR InParanoid; F1Z866; -.
DR OrthoDB; 9760333at2; -.
DR Proteomes; UP000004728; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR039426; TonB-dep_rcpt-like.
DR InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR PANTHER; PTHR32552; FERRICHROME IRON RECEPTOR-RELATED; 1.
DR PANTHER; PTHR32552:SF81; TONB-DEPENDENT OUTER MEMBRANE RECEPTOR-RELATED; 1.
DR Pfam; PF07715; Plug; 1.
DR Pfam; PF00593; TonB_dep_Rec; 1.
DR SUPFAM; SSF56935; Porins; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003357};
KW Receptor {ECO:0000313|EMBL:EGD59159.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000004728};
KW Signal {ECO:0000256|SAM:SignalP};
KW TonB box {ECO:0000256|ARBA:ARBA00023077, ECO:0000256|RuleBase:RU003357};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..792
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003272707"
FT DOMAIN 52..164
FT /note="TonB-dependent receptor plug"
FT /evidence="ECO:0000259|Pfam:PF07715"
FT DOMAIN 292..755
FT /note="TonB-dependent receptor-like beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF00593"
SQ SEQUENCE 792 AA; 85085 MW; E29DA1EB316FA31C CRC64;
MRKLLSGLLA GTGIIMAAPA LADEASAPDA TGAASGDAEP ILVTARQRVE DAQTVPTSLS
VVNALSLQRS YTVNIQQLTT LVPSLNYSSA NPRNTAFTIR GLGSSVVAVS QANDGLENGV
GFYVDGVYHA RPATAAFDFT DIDRIEVLRG PQGTLFGKNT TAGAINIVSR LPEFKPSATQ
ELSYGEKNFL QVKATATAPL IGDTVAWRLS GQITRRDGVI HNVRTAQDLN GINTQAVRGQ
LLIQPDATLR IRVIADFTNF DANCCAQVYL RVGTSLRAAS KQYAALAAAA HYSPPSTNPY
DRLTDIDASV GAKTNEGGVS INTDWNFGPA TLTSISAWRF WNWDASNDRD YTGLQIQTTQ
HIPSRQDQFS QELRVASNGE HRIGYVAGLY YFRQKLTGHP ISIYGSYGAP WLLGATTGAS
ATPVPSNLLD GYGQSGDTRF VTDSYAAFAE VNWRIVPGLV ATGGVRYTKE VKDGDYSTTV
FGGLATTNAA LIAAKLSVLR PQSYTAHDNN GSVSGRANLA WQITQRIMAY VSWARGYKSG
GINMSGLPLD SSNNPVLSTA VIRPERHDSW EAGVKTRLFA EHLMLNADVF QTKVHNFQST
IVDSSQTVAL RGYLANIPEV TVRGVEADAA FHLGQFTLTG ALSYDHGVYT SYPAGPCPLE
VQTSSTTACN LTGKPLVGLP KWSETLGLDW ALPIKIGATR SGAIALHADT NWRTSYNGDP
SLSQYTWIDG YNLTNASIGW RSSKGWEIAV FARNLFNSNY IQNLTVQAGN SGLILGTPSD
PRVIGVTFRA RE
//
