ID F1ZAZ2_9SPHN Unreviewed; 339 AA.
AC F1ZAZ2;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=LacI family transcription regulator {ECO:0000313|EMBL:EGD58230.1};
GN ORFNames=Y88_0282 {ECO:0000313|EMBL:EGD58230.1};
OS Novosphingobium nitrogenifigens DSM 19370.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=983920 {ECO:0000313|EMBL:EGD58230.1, ECO:0000313|Proteomes:UP000004728};
RN [1] {ECO:0000313|EMBL:EGD58230.1, ECO:0000313|Proteomes:UP000004728}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19370 {ECO:0000313|EMBL:EGD58230.1,
RC ECO:0000313|Proteomes:UP000004728};
RX PubMed=22156397; DOI=10.1128/JB.06381-11;
RA Strabala T.J., Macdonald L., Liu V., Smit A.M.;
RT "Draft Genome Sequence of Novosphingobium nitrogenifigens Y88T.";
RL J. Bacteriol. 194:201-201(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGD58230.1}.
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DR EMBL; AEWJ01000044; EGD58230.1; -; Genomic_DNA.
DR RefSeq; WP_008067146.1; NZ_GL876926.1.
DR AlphaFoldDB; F1ZAZ2; -.
DR STRING; 983920.Y88_0282; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_6_2_5; -.
DR InParanoid; F1ZAZ2; -.
DR OrthoDB; 8433438at2; -.
DR Proteomes; UP000004728; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06295; PBP1_CelR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF109; TRANSCRIPTIONAL REGULATOR LACI_GALR-LIKE SENSOR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000004728};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 5..59
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 339 AA; 36773 MW; 4BF159F1B288D8B7 CRC64;
MSFKPTSFDI AQRAGVSQPT VSRALRGHPS VSEATRLRIE AIAAQLNYAV DRNASRLRSR
TTNTLALLFF EDPTTDGTLI NPFFLSMLGS IARTCAQHGY DLLTSFQQSS RNWHVDYEYS
RKADGIMLLG YGDYETYRER LDQLESEGTH YVRWGAVMPD QQGMTIGCDN RLGGELAARH
LIAAGYRRIA FLGEASSHAP EIEHRYLGAC EAMRTAGLEP DPDLVVSAVT TDAAGYQAAR
ELLAKGKPFD AVFASCDLVA IGAMRAFEEA GVSIPGDIGI VGFDDIPLAS FTHPPLTTVA
QDHAQAGAAL VEALIANIRG GQPGLDMLPP RLVVRQSTR
//
