ID F1ZBH4_9SPHN Unreviewed; 743 AA.
AC F1ZBH4;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE SubName: Full=TonB-dependent receptor {ECO:0000313|EMBL:EGD58039.1};
GN ORFNames=Y88_0091 {ECO:0000313|EMBL:EGD58039.1};
OS Novosphingobium nitrogenifigens DSM 19370.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=983920 {ECO:0000313|EMBL:EGD58039.1, ECO:0000313|Proteomes:UP000004728};
RN [1] {ECO:0000313|EMBL:EGD58039.1, ECO:0000313|Proteomes:UP000004728}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19370 {ECO:0000313|EMBL:EGD58039.1,
RC ECO:0000313|Proteomes:UP000004728};
RX PubMed=22156397; DOI=10.1128/JB.06381-11;
RA Strabala T.J., Macdonald L., Liu V., Smit A.M.;
RT "Draft Genome Sequence of Novosphingobium nitrogenifigens Y88T.";
RL J. Bacteriol. 194:201-201(2012).
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC {ECO:0000256|RuleBase:RU003357}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGD58039.1}.
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DR EMBL; AEWJ01000044; EGD58039.1; -; Genomic_DNA.
DR RefSeq; WP_008067508.1; NZ_GL876926.1.
DR AlphaFoldDB; F1ZBH4; -.
DR STRING; 983920.Y88_0091; -.
DR eggNOG; COG4773; Bacteria.
DR HOGENOM; CLU_008287_15_0_5; -.
DR InParanoid; F1ZBH4; -.
DR OrthoDB; 7208812at2; -.
DR Proteomes; UP000004728; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR CDD; cd01347; ligand_gated_channel; 1.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR039426; TonB-dep_rcpt-like.
DR InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR PANTHER; PTHR32552; FERRICHROME IRON RECEPTOR-RELATED; 1.
DR PANTHER; PTHR32552:SF81; TONB-DEPENDENT OUTER MEMBRANE RECEPTOR-RELATED; 1.
DR Pfam; PF07715; Plug; 1.
DR Pfam; PF00593; TonB_dep_Rec; 1.
DR SUPFAM; SSF56935; Porins; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003357};
KW Receptor {ECO:0000313|EMBL:EGD58039.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000004728};
KW Signal {ECO:0000256|SAM:SignalP};
KW TonB box {ECO:0000256|ARBA:ARBA00023077, ECO:0000256|RuleBase:RU003357};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT SIGNAL 1..30
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 31..743
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003277712"
FT DOMAIN 66..172
FT /note="TonB-dependent receptor plug"
FT /evidence="ECO:0000259|Pfam:PF07715"
FT DOMAIN 296..706
FT /note="TonB-dependent receptor-like beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF00593"
SQ SEQUENCE 743 AA; 80571 MW; 20E138574865D6DD CRC64;
MSVDHRTVRL RRLLLAAAPL AIAVPTCAFA ADQAPAEDAS SAPSTAAVPG NNDIVVTAQK
RQQRSQDVAI PLSVVGGREI ERLGLVSPSQ IPQIATGVQL AQPNGTGSYS FAVRGVTQND
FADHEESPAA IYVDGAYVSQ MSGLAFQLFD LDRVEVLRGP QGTLFGRNAT SGLAQFISRA
PTKDLSGYLS VSYGSYNDVK TEGAVSGPLV RGSDAVLARL SFATDNHDPL FKNTAGYQDS
ENGNSQAVRG QLQFNLPDDA AKLTLIGRWG HQSVKAGAWE SVPSIADPVS GYGYFGGSTN
ALGYGPSGDF QTQGNANGYS RISTLQGTAT LDVPVSAIGG TWTTVFDYQW LKKDYQEDSD
TTPLSVFEFY NGSRVHQIST ETRLNGATGR LKWIAGAYWL HIAGNYDEGA NGSSYGGLAD
LYRLTTGSVA LFGQVEYALT RKLNLTVGGR YTWDWKDIGY SASYPGFSYA FDAATYGALA
HRNDGFWSGK VALDYHFTPT VLGYVSVNRG VKGGSFNAPL DPTTVVGNPA SFSFKPETLV
DYEAGVKSDI FGKRLRVNLS TFYYDYSNYQ ALRFINLTQL VSNANAEYYG GELETRFTPN
DRWTFEANLA YSHGTVKDIA LNSEGARDYV PANAPRWSGN AVIRYTVPLK SGKFAAQIDG
NFVSKQYYAL TDAPDTAQNF YALGNIRLNY TTNNGHWDIG FAVENVTDHH YATMAFDVAS
FLGLAQRYPG RPRWFSGTVS YHF
//
