ID F2CZW2_HORVV Unreviewed; 1092 AA.
AC F2CZW2;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 80.
DE SubName: Full=Predicted protein {ECO:0000313|EMBL:BAJ88383.1};
OS Hordeum vulgare subsp. vulgare (Domesticated barley).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
OX NCBI_TaxID=112509 {ECO:0000313|EMBL:BAJ88383.1};
RN [1] {ECO:0000313|EMBL:BAJ88383.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Shoot {ECO:0000313|EMBL:BAJ88383.1};
RX PubMed=21415278; DOI=10.1104/pp.110.171579;
RA Matsumoto T., Tanaka T., Sakai H., Amano N., Kanamori H., Kurita K.,
RA Kikuta A., Kamiya K., Yamamoto M., Ikawa H., Fujii N., Hori K., Itoh T.,
RA Sato K.;
RT "Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived
RT from 12 clone libraries.";
RL Plant Physiol. 156:20-28(2011).
RN [2] {ECO:0000313|Proteomes:UP000011116}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Morex {ECO:0000313|Proteomes:UP000011116};
RX PubMed=23075845; DOI=10.1038/nature11543;
RG The International Barley Genome Sequencing Consortium;
RA Mayer K.F., Waugh R., Brown J.W., Schulman A., Langridge P., Platzer M.,
RA Fincher G.B., Muehlbauer G.J., Sato K., Close T.J., Wise R.P., Stein N.;
RT "A physical, genetic and functional sequence assembly of the barley
RT genome.";
RL Nature 491:711-716(2012).
RN [3] {ECO:0000313|EnsemblPlants:HORVU.MOREX.r3.1HG0058970.1}
RP IDENTIFICATION.
RC STRAIN=subsp. vulgare
RC {ECO:0000313|EnsemblPlants:HORVU.MOREX.r3.1HG0058970.1};
RG EnsemblPlants;
RL Submitted (JAN-2022) to UniProtKB.
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DR EMBL; AK357168; BAJ88383.1; -; mRNA.
DR AlphaFoldDB; F2CZW2; -.
DR PaxDb; 4513-MLOC_61783-1; -.
DR EnsemblPlants; HORVU.MOREX.r3.1HG0058970.1; HORVU.MOREX.r3.1HG0058970.1; HORVU.MOREX.r3.1HG0058970.
DR Gramene; HORVU.MOREX.r3.1HG0058970.1; HORVU.MOREX.r3.1HG0058970.1; HORVU.MOREX.r3.1HG0058970.
DR eggNOG; ENOG502QSCJ; Eukaryota.
DR HOGENOM; CLU_005343_0_0_1; -.
DR Proteomes; UP000011116; Chromosome 1H.
DR ExpressionAtlas; F2CZW2; baseline.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd00065; FYVE_like_SF; 1.
DR CDD; cd13365; PH_PLC_plant-like; 1.
DR Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR Gene3D; 2.130.10.30; Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR013591; Brevis_radix_dom.
DR InterPro; IPR027988; BRX_N.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR001849; PH_domain.
DR InterPro; IPR009091; RCC1/BLIP-II.
DR InterPro; IPR000408; Reg_chr_condens.
DR InterPro; IPR000306; Znf_FYVE.
DR InterPro; IPR017455; Znf_FYVE-rel.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR22870:SF474; OS05G0384800 PROTEIN; 1.
DR PANTHER; PTHR22870; REGULATOR OF CHROMOSOME CONDENSATION; 1.
DR Pfam; PF08381; BRX; 1.
DR Pfam; PF16627; BRX_assoc; 1.
DR Pfam; PF13713; BRX_N; 1.
DR Pfam; PF01363; FYVE; 1.
DR Pfam; PF16457; PH_12; 1.
DR Pfam; PF00415; RCC1; 6.
DR PRINTS; PR00633; RCCNDNSATION.
DR SMART; SM00064; FYVE; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF50729; PH domain-like; 1.
DR SUPFAM; SSF50985; RCC1/BLIP-II; 1.
DR PROSITE; PS51514; BRX; 1.
DR PROSITE; PS00626; RCC1_2; 2.
DR PROSITE; PS50012; RCC1_3; 7.
DR PROSITE; PS50178; ZF_FYVE; 1.
PE 2: Evidence at transcript level;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000011116};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00091}.
FT REPEAT 268..329
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 330..381
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 382..436
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 437..488
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 501..552
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 553..604
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 605..656
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT DOMAIN 661..723
FT /note="FYVE-type"
FT /evidence="ECO:0000259|PROSITE:PS50178"
FT DOMAIN 1020..1075
FT /note="BRX"
FT /evidence="ECO:0000259|PROSITE:PS51514"
FT REGION 138..188
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 219..240
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 825..854
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 967..1027
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 865..934
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 142..173
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 219..238
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 825..850
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 967..1002
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1003..1024
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1092 AA; 118227 MW; E0348DD78B955E6D CRC64;
MMSDASSDLG GGRAGPVERD IEQAITALKK GAYLLKYGRR GKPKFCPFRL SNDESILIWF
SGKEEKQLRL SHVSRIIPGQ RTAIFQRYPR PEKECQSFSL ISHDRSLDII CKDKDEAEVW
FAGLKTLISR SHQRKWRTES RSDMLSSGTT SPRTYTRRSS PLSSPFSSND SVHKDGSENY
RLRSPYGSPP KAGLDKAFSD IVSYAAPPRP FFPSDSNVGS VHSVSSGHSD NTNGNSRGIP
MDAFRVSLSS AVSSSSHGSG HDDGDALGDV FIWGEGTGEG ILGGGNSRLG SSSGAKMDCL
VPKPLEFAGR LDVQNISCGG RHATLVTKQG EVYSWGEESG GRLGHGVDCD VPQPKLIDAL
AHMNIELVAC GEYHTCAVTL SGDLYTWGNG TFNFGLSGHG NEVSHWMPKR LNGPLEGIHV
SSISCGPWHT AVVTSAGQLF TFGDGSFGVL GHGDRQSISV PREVESLKGL RTVRAACGVW
HTAAVVEVMV GNSSSSNCSS GKIFTWGDGD KGRLGHGDKE TRLVPTCVAS LVEPNFCQVA
CGHCFTVALT TSGHVYTMGS SVYGQLGNPQ ADGMVPARVE GKLHKNFVEE ISCGAYHVAV
LTSRTEVYTW GKGANGRLGH GDTDDRNSPT LVEALKDKQV RSVVCGINFT AAICIHKWVS
GVDQSMCSGC RLPFNLRRKR HNCYNCALVF CHSCSSKKSL KASLAPNPNK PYRVCDSCYG
KLNKGPETDR YSSAKRGAIL QGFNDSINDD LETRSNVQLS RLSSMESFKN MDSRYSKKNK
KFEFNSSRVS PIPNGSSHWS GLNISKSFGS SKKFFSASVP GSRIASRATS PVSRRTSPPR
STTPTPTLGG LTSPRVVVDG ARPIKDNLSQ EVVHLRSQVE NLTRKSHLLE VELERTTKQL
KEAISIAGEE TAKCKAAKEV IKSLTAQLKG MAEKLPEGAG AGAGAVKYNR LPPLSGVPVQ
NDISMATENL GSPRNSGEPY SNGSNGLTVS NGPSSVRNKT HLEVGKNGTR QPDSDSKPES
EWVEQDEPGV YITLTALPGG ARDLKRVRFS RKRFSETQAE QWWQENRARV YELYNVRVVD
KSVASIDSDV PH
//
