ID F2I3Z9_PELSM Unreviewed; 68 AA.
AC F2I3Z9;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE SubName: Full=Cold shock DNA-binding domain protein {ECO:0000313|EMBL:AEA81037.1};
GN OrderedLocusNames=SAR11G3_00562 {ECO:0000313|EMBL:AEA81037.1};
OS Pelagibacter sp. (strain IMCC9063).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Candidatus Pelagibacterales;
OC Candidatus Pelagibacteraceae; Pelagibacter.
OX NCBI_TaxID=1002672 {ECO:0000313|EMBL:AEA81037.1, ECO:0000313|Proteomes:UP000009181};
RN [1] {ECO:0000313|EMBL:AEA81037.1, ECO:0000313|Proteomes:UP000009181}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IMCC9063 {ECO:0000313|EMBL:AEA81037.1,
RC ECO:0000313|Proteomes:UP000009181};
RX PubMed=21515764; DOI=10.1128/JB.05033-11;
RA Oh H.M., Kang I., Lee K., Jang Y., Lim S.I., Cho J.C.;
RT "Complete genome sequence of strain IMCC9063, belonging to SAR11 subgroup
RT 3, isolated from the Arctic Ocean.";
RL J. Bacteriol. 193:3379-3380(2011).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU000408}.
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DR EMBL; CP002511; AEA81037.1; -; Genomic_DNA.
DR RefSeq; WP_013695202.1; NC_015380.1.
DR AlphaFoldDB; F2I3Z9; -.
DR STRING; 1002672.SAR11G3_00562; -.
DR KEGG; pel:SAR11G3_00562; -.
DR eggNOG; COG1278; Bacteria.
DR HOGENOM; CLU_117621_2_1_5; -.
DR OrthoDB; 9791685at2; -.
DR Proteomes; UP000009181; Chromosome.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR012156; Cold_shock_CspA.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR Pfam; PF00313; CSD; 1.
DR PIRSF; PIRSF002599; Cold_shock_A; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA-binding {ECO:0000313|EMBL:AEA81037.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000009181}.
FT DOMAIN 2..67
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
SQ SEQUENCE 68 AA; 7502 MW; 663F9DCDA065EC05 CRC64;
MSLKGKVKWF NEKKGFGFIE REDGKKDVFV HISAVQAAGL DYLDEGSSIN FDVEDGPKGP
SAVNLKQE
//
