GenomeNet

Database: UniProt
Entry: F2IVR4_POLGS
LinkDB: F2IVR4_POLGS
Original site: F2IVR4_POLGS 
ID   F2IVR4_POLGS            Unreviewed;       262 AA.
AC   F2IVR4;
DT   31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   31-MAY-2011, sequence version 1.
DT   27-MAR-2024, entry version 58.
DE   SubName: Full=Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ADZ69171.1};
GN   Name=glpR1 {ECO:0000313|EMBL:ADZ69171.1};
GN   OrderedLocusNames=SL003B_0741 {ECO:0000313|EMBL:ADZ69171.1};
OS   Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Paracoccaceae; Polymorphum.
OX   NCBI_TaxID=991905 {ECO:0000313|EMBL:ADZ69171.1, ECO:0000313|Proteomes:UP000008130};
RN   [1] {ECO:0000313|EMBL:ADZ69171.1, ECO:0000313|Proteomes:UP000008130}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LMG 25793 / CGMCC 1.9160 / SL003B-26A1
RC   {ECO:0000313|Proteomes:UP000008130};
RX   PubMed=21478361; DOI=10.1128/JB.00333-11;
RA   Li S.G., Tang Y.Q., Nie Y., Cai M., Wu X.L.;
RT   "Complete genome sequence of Polymorphum gilvum SL003B-26A1T, a crude oil-
RT   degrading bacterium from oil-polluted saline soil.";
RL   J. Bacteriol. 193:2894-2895(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002568; ADZ69171.1; -; Genomic_DNA.
DR   RefSeq; WP_013651491.1; NC_015259.1.
DR   AlphaFoldDB; F2IVR4; -.
DR   STRING; 991905.SL003B_0741; -.
DR   KEGG; pgv:SL003B_0741; -.
DR   PATRIC; fig|991905.3.peg.751; -.
DR   eggNOG; COG1349; Bacteria.
DR   HOGENOM; CLU_060699_0_0_5; -.
DR   OrthoDB; 9814815at2; -.
DR   Proteomes; UP000008130; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 3.30.750.70; 4-hydroxybutyrate coenzyme like domains; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR014036; DeoR_C.
DR   InterPro; IPR001034; DeoR_HTH.
DR   InterPro; IPR037171; NagB/RpiA_transferase-like.
DR   InterPro; IPR018356; Tscrpt_reg_HTH_DeoR_CS.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30363:SF4; GLYCEROL-3-PHOSPHATE REGULON REPRESSOR; 1.
DR   PANTHER; PTHR30363; HTH-TYPE TRANSCRIPTIONAL REGULATOR SRLR-RELATED; 1.
DR   Pfam; PF00455; DeoRC; 1.
DR   Pfam; PF08220; HTH_DeoR; 1.
DR   PRINTS; PR00037; HTHLACR.
DR   SMART; SM01134; DeoRC; 1.
DR   SMART; SM00420; HTH_DEOR; 1.
DR   SUPFAM; SSF100950; NagB/RpiA/CoA transferase-like; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS00894; HTH_DEOR_1; 1.
DR   PROSITE; PS51000; HTH_DEOR_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008130};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          7..62
FT                   /note="HTH deoR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51000"
SQ   SEQUENCE   262 AA;  28499 MW;  4D343BA295B531BA CRC64;
     MQAQYDVTKR QADIADLVQA HGFMAVDALA ERFDVTTQTI RRDLNRLCEM GVLRRTHGGV
     EPPVLSANMH YRARQILNLP AKRRIAACVA AMIPDGASIA FSIGTTPEIV MQALVAHDRL
     KIFTNNLNVA FSACENAGFE ITVAGGRLRP GDRDILGTST QEFFASYKVD FGIFGVAGVD
     EDGTLLDFHE EEVAARQAIL ANCRQSILVL DHSKFGRAAH VRGGHISEVA QIVCDRQVPS
     ALVVLLARTR TRILSATTED GG
//
DBGET integrated database retrieval system