ID F3AMH4_9FIRM Unreviewed; 717 AA.
AC F3AMH4;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE RecName: Full=S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126};
GN ORFNames=HMPREF0987_01648 {ECO:0000313|EMBL:EGG85554.1};
OS Lachnospiraceae bacterium 9_1_43BFAA.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=658088 {ECO:0000313|EMBL:EGG85554.1, ECO:0000313|Proteomes:UP000003620};
RN [1] {ECO:0000313|EMBL:EGG85554.1, ECO:0000313|Proteomes:UP000003620}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=9_1_43BFAA {ECO:0000313|EMBL:EGG85554.1,
RC ECO:0000313|Proteomes:UP000003620};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Daigneault M., Strauss J.,
RA Ambrose C., Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S.,
RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M.,
RA Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E.,
RA Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E.R.,
RA Heiman D., Howarth C., Larson L., Lui A., MacDonald P.J.P., Mehta T.,
RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., Roberts A.,
RA Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., White J.,
RA Yandava C., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Lachnospiraceae bacterium 9_1_43BFAA.";
RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGG85554.1}.
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DR EMBL; ACTX01000009; EGG85554.1; -; Genomic_DNA.
DR AlphaFoldDB; F3AMH4; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_9; -.
DR Proteomes; UP000003620; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000003620}.
FT DOMAIN 645..715
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 717 AA; 80410 MW; F01C0F31F18F480B CRC64;
MDMIQKLTEE LEVKKWQVEA AVRLIDEGNT IPFIARYRKE ATGSLNDEQL RSLHEQLIYL
RNLEEKKEQV LASIEEQGKL TEELRVQIIN AQTLVAVEDL YRPYRPKRRT RATIAKEKGL
EPLATLLMLQ RIQKPLEEEA QKYISAEKEV HTVEEAIAGA KDILAETVSD EADYRSFIRN
LTVKEGKMIS SAKDDSVQSV YEMYYSFEEP VSRLAGHRIL ALNRGEKEKI LNVKIEAPEE
KILRYLEKKI IVSENPYTSE YLKEVAEDSY KRLIAPAIER EIRSSLTEKA EDSAITVFGK
NLEQLLMQPP IVGQVVLGWD PAFRTGCKLA VVDETGKVLD TTVIYPTAPT TPQKIQAAKD
TLKKLIRKYH ITLISVGNGT ASRESEMILV ELLKEIPEKV QYVIVNEAGA SVYSASKLAT
EEFPNFDVGQ RSAASIARRL QDPLAELVKI DPKSIGVGQY QHDMNQKKLS EALSGVVESC
VNRVGVDLNT ASAPLLSYIS GISSAIAKNI VAYREEHGKF QSRKELLKVA KLGPKAFEQC
AGFLKITDGK NPLDATSVHP ESYEAAEKLL KQQGFSTEEI RRGGLRGLSK TIRNEKKLAE
ELGIGEITLQ DIVKELEKPG RDPREEMPKP ILRTDVLEMK DLTEGMVLKG TVRNVIDFGV
FVDIGVHQDG LVHISQITDK KFIKHPLEAV SVGDIVDVKV MSVDVQKKRI QLTMKGI
//
