ID F3KLM2_9ARCH Unreviewed; 928 AA.
AC F3KLM2;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Copper resistance D domain-containing protein {ECO:0000313|EMBL:EGG41606.1};
GN ORFNames=Nlim_1405 {ECO:0000313|EMBL:EGG41606.1};
OS Candidatus Nitrosarchaeum limnium SFB1.
OC Archaea; Nitrososphaerota; Nitrososphaeria; Nitrosopumilales;
OC Nitrosopumilaceae; Nitrosarchaeum.
OX NCBI_TaxID=886738 {ECO:0000313|EMBL:EGG41606.1};
RN [1] {ECO:0000313|EMBL:EGG41606.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SFB1 {ECO:0000313|EMBL:EGG41606.1};
RX PubMed=21364937; DOI=10.1371/journal.pone.0016626;
RA Blainey P.C., Mosier A.C., Potanina A., Francis C.A., Quake S.R.;
RT "Genome of a low-salinity ammonia-oxidizing archaeon determined by single-
RT cell and metagenomic analysis.";
RL PLoS ONE 6:E16626-E16626(2011).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGG41606.1}.
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DR EMBL; AEGP01000050; EGG41606.1; -; Genomic_DNA.
DR AlphaFoldDB; F3KLM2; -.
DR STRING; 886738.Nlim_1405; -.
DR PATRIC; fig|886738.10.peg.1537; -.
DR HOGENOM; CLU_302009_0_0_2; -.
DR Proteomes; UP000004348; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:InterPro.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0005507; F:copper ion binding; IEA:InterPro.
DR GO; GO:0006825; P:copper ion transport; IEA:InterPro.
DR GO; GO:0046688; P:response to copper ion; IEA:InterPro.
DR Gene3D; 2.60.40.1220; -; 1.
DR Gene3D; 2.120.10.30; TolB, C-terminal domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR011042; 6-blade_b-propeller_TolB-like.
DR InterPro; IPR032694; CopC/D.
DR InterPro; IPR007348; CopC_dom.
DR InterPro; IPR008457; Cu-R_CopD_dom.
DR InterPro; IPR014755; Cu-Rt/internalin_Ig-like.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR34820; INNER MEMBRANE PROTEIN YEBZ; 1.
DR PANTHER; PTHR34820:SF4; INNER MEMBRANE PROTEIN YEBZ; 1.
DR Pfam; PF04234; CopC; 1.
DR Pfam; PF05425; CopD; 1.
DR SUPFAM; SSF63829; Calcium-dependent phosphotriesterase; 1.
DR SUPFAM; SSF81296; E set domains; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Copper {ECO:0000256|ARBA:ARBA00023008};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022771};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT TRANSMEM 148..167
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 188..209
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 229..247
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 259..279
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 291..313
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 334..355
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 367..389
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 420..438
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 895..912
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 22..117
FT /note="CopC"
FT /evidence="ECO:0000259|Pfam:PF04234"
FT DOMAIN 331..433
FT /note="Copper resistance protein D"
FT /evidence="ECO:0000259|Pfam:PF05425"
SQ SEQUENCE 928 AA; 102937 MW; 8EFB2369FE27D90F CRC64;
MRKTVIILLL VISISIPYAS AHPFTIDSTP NSSTNAPVGT TKIIVHFSEP VELDFSFLKV
IDSNGEEIDN KDSKYFDGDS SLIVTTPPLE EGVYTVTTKA LSKIDGHLVP SAFVFAVGDA
KIDVGASSSK DVSDIVFFPE AGSRFPGLVG QTIVLGVLIA SILIWGTQNK QLIKKEEEKL
EQSHHGKFMK ITGIGLLLIF ASNILMLAIQ AIRLETSVIN VIQTNFGNIW LIRMAITIVL
LALWFGMDRK KKLSIKNKIP MLAVTLVLIG TSSLIGHGAA SGEISAIVLD YIHNFVAAVW
IGGIIYFVFT LLPTLSQLEE TKREKMTLVL IPRFSIMVVI AVGIVIITGP TLMWLLESNV
NLITESIYGK LIFAKIAIAA IMIGFGGYFQ FKIQKNAERD LQKGTIAIYK KLKRSLKFDV
ALGITLLGVV ALLSNGTLPA GEINQVDAQK VSYGFHSIEF SEKTKFDVEI TPFSSGTNTI
FIKMSDFEDK PLIDSNQIKV KISNPQRNIA PIEIPMKVIN QEESKPIEFQ GEITFGFSGQ
WQVEIENLRT ENANESVILN LLVKPRLSDI KTEIIEYELP QASKPLYPLF DGKDSIWVSD
PSAPKLWKFS LDSKNFTSYS FDGLTSIILT KDNQGKIWFT DTPRNQIGYF DPSTQKITTK
TLPKIDPVIN DNIATFIQAD FDGNIWISVT NKDTILKYQP KLDSFEEVKL PTRGSVPFAL
TIDGEGKIWF TESQSGKIGF INPQNNKISE FSPEEPLASP EALVFDDKGN LWIAEHTGLA
ITKFDPILET FEKITVPDKD ALPYGMAFDK YGNIWIAQHT VDKIAAYDPD NKNLIEVPIP
TTTSFAQFSS SDDKGNVWFV EQQGNKLSMI KTTEIPIIAS QIPNTNTFQL KYTEIVSPLI
AMGIIATSLF FVKNIKDKRR LNELILSG
//
