ID F3PJ68_9BACE Unreviewed; 565 AA.
AC F3PJ68;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=Peptidase, S41 family {ECO:0000313|EMBL:EGF51074.1};
GN ORFNames=HMPREF9445_02065 {ECO:0000313|EMBL:EGF51074.1};
OS Bacteroides clarus YIT 12056.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=762984 {ECO:0000313|EMBL:EGF51074.1, ECO:0000313|Proteomes:UP000010321};
RN [1] {ECO:0000313|EMBL:EGF51074.1, ECO:0000313|Proteomes:UP000010321}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YIT 12056 {ECO:0000313|EMBL:EGF51074.1,
RC ECO:0000313|Proteomes:UP000010321};
RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L.,
RA Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C.,
RA Hall O., Minx P., Tomlinson C., Mitreva M., Hou S., Chen J., Wollam A.,
RA Pepin K.H., Johnson M., Bhonagiri V., Zhang X., Suruliraj S., Warren W.,
RA Chinwalla A., Mardis E.R., Wilson R.K.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the peptidase S41A family.
CC {ECO:0000256|ARBA:ARBA00009179, ECO:0000256|RuleBase:RU004404}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGF51074.1}.
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DR EMBL; AFBM01000023; EGF51074.1; -; Genomic_DNA.
DR RefSeq; WP_009122187.1; NZ_GL882595.1.
DR AlphaFoldDB; F3PJ68; -.
DR STRING; 762984.SAMN05444376_2232; -.
DR eggNOG; COG0793; Bacteria.
DR HOGENOM; CLU_017295_2_0_10; -.
DR Proteomes; UP000010321; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008236; F:serine-type peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00988; PDZ_CTP_protease; 1.
DR CDD; cd07560; Peptidase_S41_CPP; 1.
DR Gene3D; 2.30.42.10; -; 1.
DR Gene3D; 3.30.750.44; -; 1.
DR InterPro; IPR029045; ClpP/crotonase-like_dom_sf.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR041489; PDZ_6.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR004447; Peptidase_S41A.
DR InterPro; IPR005151; Tail-specific_protease.
DR NCBIfam; TIGR00225; prc; 1.
DR PANTHER; PTHR32060:SF22; CARBOXYL-TERMINAL-PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED; 1.
DR PANTHER; PTHR32060; TAIL-SPECIFIC PROTEASE; 1.
DR Pfam; PF17820; PDZ_6; 1.
DR Pfam; PF03572; Peptidase_S41; 1.
DR SMART; SM00228; PDZ; 1.
DR SMART; SM00245; TSPc; 1.
DR SUPFAM; SSF52096; ClpP/crotonase; 1.
DR SUPFAM; SSF50156; PDZ domain-like; 1.
DR PROSITE; PS50106; PDZ; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|RuleBase:RU004404};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Protease {ECO:0000256|RuleBase:RU004404};
KW Serine protease {ECO:0000256|ARBA:ARBA00022825,
KW ECO:0000256|RuleBase:RU004404}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..24
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 88..155
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
SQ SEQUENCE 565 AA; 63557 MW; 2758051E956B1E56 CRC64;
MKYLKIRWIA VLLSVVGTSF FFGFKSGDSR SFQVAKNLDI FNSIVKELDM FYVDTIDPNK
TIRTGIESML YSLDPYTQYF PEDDQSELEQ MLKNTYGGIG SIITWNTKLK RSMIAEPYEN
MPAATVGLKA GDILLEIDGK DLAGKNNQEV SEMLRGQVGT SFKLKVQRPG TEQPLEFDIV
RRSIQLPFIP YYAMLDNNIG YINLSTFSGN PSKEFKQAFL DLKKQGITSL VIDLRNNGGG
LLDEAVEIAN FFLPRGKTLV TTKGKTKQAS NTYKTLREPL DLEIPLAVLV NSATASASEI
LAGALQDYDR AVVVGNRTFG KGLVQTTRPL PYGGTMKLTT SKYYIPSGRC VQAIDYKHRN
EDGSVGRIPD SLTTVFHTAA GREVRDGGGV TPDITVKQDK LPNILFYLVN DNLIFNYATE
YCLKHPTIPA PKDFKITDAD YADFKAMVQK ADFKYDQQTE KILKNLKEMA EFEGYLTDAS
DEFKALEKKL SHNLDRDLDH FSKDIKEMIA VEIIKRYYYQ RGSIIQQLKD DKDLKEAVGI
LTAPEEYKEM LSVPPVKPDE SKKGK
//
