ID F3PYX5_9BACE Unreviewed; 410 AA.
AC F3PYX5;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EGF49298.1};
GN ORFNames=HMPREF9446_03933 {ECO:0000313|EMBL:EGF49298.1};
OS Bacteroides fluxus YIT 12057.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=763034 {ECO:0000313|EMBL:EGF49298.1, ECO:0000313|Proteomes:UP000003416};
RN [1] {ECO:0000313|EMBL:EGF49298.1, ECO:0000313|Proteomes:UP000003416}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YIT 12057 {ECO:0000313|EMBL:EGF49298.1,
RC ECO:0000313|Proteomes:UP000003416};
RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L.,
RA Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C.,
RA Hall O., Minx P., Tomlinson C., Mitreva M., Hou S., Chen J., Wollam A.,
RA Pepin K.H., Johnson M., Bhonagiri V., Zhang X., Suruliraj S., Warren W.,
RA Chinwalla A., Mardis E.R., Wilson R.K.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGF49298.1}.
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DR EMBL; AFBN01000115; EGF49298.1; -; Genomic_DNA.
DR RefSeq; WP_009127101.1; NZ_GL882697.1.
DR AlphaFoldDB; F3PYX5; -.
DR STRING; 763034.HMPREF9446_03933; -.
DR eggNOG; COG4974; Bacteria.
DR HOGENOM; CLU_033139_2_0_10; -.
DR Proteomes; UP000003416; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd01185; INTN1_C_like; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR035386; Arm-DNA-bind_5.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR025269; SAM-like_dom.
DR PANTHER; PTHR30349:SF84; INTEGRASE_RECOMBINASE YOEC-RELATED; 1.
DR PANTHER; PTHR30349; PHAGE INTEGRASE-RELATED; 1.
DR Pfam; PF17293; Arm-DNA-bind_5; 1.
DR Pfam; PF13102; Phage_int_SAM_5; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 4: Predicted;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000003416}.
FT DOMAIN 114..202
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 222..398
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 410 AA; 47987 MW; D33E5FE32EA7C363 CRC64;
MAMQNNSFSV LFFIKKSKLL KNGEAPICMR ITVNSKRAEV QVKRSVEPDK WNHLKGCAVG
KDRKHQEINL YLETVRNRVF QIHRQLEADG KPITAVTIKN IFYGGYDSPK MLIETFNEHN
QEYRELMDKE YAKGTVLRYE RTVRYLVEFM REQYNCADIP LKSINYEFIT KFEHFIKTQK
GCAQNATVKY LKNLKKITKT AILKKWINED PFADIHFKQT KTNRDFLNES ELRRIIAKDI
DIERLQTVRD IFIFCSFTGL AFTDVKHLKA EHIVQADDGR WWIRKAREKT DNMCDIPLLD
IPRLILEKYK SRPGYSERGF LLPVPSNQRM NGYLKEIADI CHIKKKLSTH IARHTFASLA
IANKVSLESI AKMLGHTDIR TTRIYAKIMN STIAFEMQTL QDKFALPTHP
//
