ID F4AWS5_DOKS4 Unreviewed; 668 AA.
AC F4AWS5;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:AEE20733.1};
GN OrderedLocusNames=Krodi_2758 {ECO:0000313|EMBL:AEE20733.1};
OS Dokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5)).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Dokdonia.
OX NCBI_TaxID=983548 {ECO:0000313|EMBL:AEE20733.1, ECO:0000313|Proteomes:UP000008290};
RN [1] {ECO:0000313|EMBL:AEE20733.1, ECO:0000313|Proteomes:UP000008290}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=4H-3-7-5 {ECO:0000313|EMBL:AEE20733.1,
RC ECO:0000313|Proteomes:UP000008290};
RX PubMed=21725025; DOI=10.1128/JB.05518-11;
RA Klippel B., Lochner A., Bruce D.C., Walston Davenport K., Detter C.,
RA Goodwin L.A., Han J., Han S., Hauser L., Land M.L., Nolan M.,
RA Ovchinnikova G., Pennacchio L., Pitluck S., Tapia R., Woyke T.,
RA Wiebusch S., Basner A., Abe F., Horikoshi K., Keller M., Antranikian G.;
RT "Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and
RT Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the
RT family Flavobacteriaceae.";
RL J. Bacteriol. 193:4545-4546(2011).
RN [2] {ECO:0000313|Proteomes:UP000008290}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=4H-3-7-5 {ECO:0000313|Proteomes:UP000008290};
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A.,
RA Antranikian F.I., Woyke T.;
RT "Complete sequence of Krokinobacter diaphorus 4H-3-7-5.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=4H-3-7-5;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A.,
RA Antranikian F.I., Woyke T.;
RT "Complete sequence of Krokinobacter sp. 4H-3-7-5.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the polysaccharide synthase family.
CC {ECO:0000256|ARBA:ARBA00007430}.
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DR EMBL; CP002528; AEE20733.1; -; Genomic_DNA.
DR AlphaFoldDB; F4AWS5; -.
DR STRING; 983548.Krodi_2758; -.
DR KEGG; kdi:Krodi_2758; -.
DR eggNOG; COG1086; Bacteria.
DR HOGENOM; CLU_013560_5_2_10; -.
DR Proteomes; UP000008290; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd05237; UDP_invert_4-6DH_SDR_e; 1.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 2.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR003869; Polysac_CapD-like.
DR PANTHER; PTHR43318:SF1; POLYSACCHARIDE BIOSYNTHESIS PROTEIN EPSC-RELATED; 1.
DR PANTHER; PTHR43318; UDP-N-ACETYLGLUCOSAMINE 4,6-DEHYDRATASE; 1.
DR Pfam; PF02719; Polysacc_synt_2; 1.
DR SUPFAM; SSF51735; NAD(P)-binding Rossmann-fold domains; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 29..49
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 99..119
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 125..149
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 307..597
FT /note="Polysaccharide biosynthesis protein CapD-like"
FT /evidence="ECO:0000259|Pfam:PF02719"
SQ SEQUENCE 668 AA; 75043 MW; C4E24D3CCDD98E44 CRC64;
MTRLYRAINR LFSDENRLDI RNIKYLPRWS VLFIDTSLVL CALSITYLLL NDLNIKPLNV
LTIGQQVSLI VGVTFVNLLV FRTYAGLIRH SSLMDALKLL FATLSTFLVL TLINLFYLRF
WGGKIFLNSG LIMFFVTSFT ALFIFRLVIK QLYESFKVVH QDEELIQAVI VGIDDGAISI
AAALDIEHPQ RFVIKGFVST RQNKSLRILD KPVLEMDGSI HTIVQKLKAS AIIFAGNTLN
SEERFKLVKD CLEHDIKVFN SPLVINWSEK TTVTDQLKSL QIEDLLNREP IKLNDSVKSK
KILGKTILVT GGAGSIGSEI ARQVASYHPT KLIILDQAES PMHALSLELM SKFPNLDIEF
TICDVANRSR LRVLFNTFKI DAIYHAAAYK HVPLMEDNPS EAILTNIFGT KNLADIAVEN
SVSHFVMVST DKAVNPSNVM GATKRAAEMY VQSKYFDTLE KSKKKNVTKF ITTRFGNVLG
SNGSVVPLFK KQIEEGGPVT ITHPDIIRYF MTIPEACHLV LEAGSMGKGG EIFIFDMGEP
VRIMDLAEKM IKLAGYTTNE DMEIKITGLR PGEKLYEELL LDTSKTLPTH HDKIMISEDV
IYDYNFVNEL ISKIIKAAVK NNNTISVAKL KTLIPEFKSN NSTYELLDVE VDNQESTISD
FSTKASTK
//
