ID F4B1F2_DOKS4 Unreviewed; 531 AA.
AC F4B1F2;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Peptidase M56 BlaR1 {ECO:0000313|EMBL:AEE19390.1};
GN OrderedLocusNames=Krodi_1407 {ECO:0000313|EMBL:AEE19390.1};
OS Dokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5)).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Dokdonia.
OX NCBI_TaxID=983548 {ECO:0000313|EMBL:AEE19390.1, ECO:0000313|Proteomes:UP000008290};
RN [1] {ECO:0000313|EMBL:AEE19390.1, ECO:0000313|Proteomes:UP000008290}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=4H-3-7-5 {ECO:0000313|EMBL:AEE19390.1,
RC ECO:0000313|Proteomes:UP000008290};
RX PubMed=21725025; DOI=10.1128/JB.05518-11;
RA Klippel B., Lochner A., Bruce D.C., Walston Davenport K., Detter C.,
RA Goodwin L.A., Han J., Han S., Hauser L., Land M.L., Nolan M.,
RA Ovchinnikova G., Pennacchio L., Pitluck S., Tapia R., Woyke T.,
RA Wiebusch S., Basner A., Abe F., Horikoshi K., Keller M., Antranikian G.;
RT "Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and
RT Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the
RT family Flavobacteriaceae.";
RL J. Bacteriol. 193:4545-4546(2011).
RN [2] {ECO:0000313|Proteomes:UP000008290}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=4H-3-7-5 {ECO:0000313|Proteomes:UP000008290};
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A.,
RA Antranikian F.I., Woyke T.;
RT "Complete sequence of Krokinobacter diaphorus 4H-3-7-5.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=4H-3-7-5;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A.,
RA Antranikian F.I., Woyke T.;
RT "Complete sequence of Krokinobacter sp. 4H-3-7-5.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002528; AEE19390.1; -; Genomic_DNA.
DR RefSeq; WP_013750898.1; NC_015496.1.
DR AlphaFoldDB; F4B1F2; -.
DR STRING; 983548.Krodi_1407; -.
DR KEGG; kdi:Krodi_1407; -.
DR eggNOG; COG4219; Bacteria.
DR HOGENOM; CLU_013798_1_1_10; -.
DR OrthoDB; 1522859at2; -.
DR Proteomes; UP000008290; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR CDD; cd07341; M56_BlaR1_MecR1_like; 1.
DR Gene3D; 3.30.1150.10; -; 1.
DR InterPro; IPR008756; Peptidase_M56.
DR InterPro; IPR037682; TonB_C.
DR PANTHER; PTHR33446:SF2; PROTEIN TONB; 1.
DR PANTHER; PTHR33446; PROTEIN TONB-RELATED; 1.
DR Pfam; PF05569; Peptidase_M56; 1.
DR Pfam; PF03544; TonB_C; 1.
DR SUPFAM; SSF74653; TolA/TonB C-terminal domain; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Transport {ECO:0000256|ARBA:ARBA00022927}.
FT TRANSMEM 6..23
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 35..58
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 87..107
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 257..277
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 151..248
FT /note="Peptidase M56"
FT /evidence="ECO:0000259|Pfam:PF05569"
FT DOMAIN 468..529
FT /note="TonB C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03544"
SQ SEQUENCE 531 AA; 60060 MW; 9C3B0C62147B3DC1 CRC64;
MIAYVVQAIC FQAIFLAVYY LLLRKETFFV CNRIYLLLTP LIALVLPFIK IATLQTVVPI
EAMSVILPEV VIGEATTSQA EQTSSFVIPW LSIYFVGVAV SALVLVIKVK SFISYLSFKR
RGEHIINVPN STEAFTFFKY IFIGEDIDTL SRKQILTHEQ IHAKQGHTWD LIFFEIMKII
FWFNPLIYFN QKLISTVHEY LADQKATAAS SKKAYYEELL NTAFGTNNFS FTNTFFNQSL
IKNRIIMLQK SKSKKSALIK YVVIVPLILA MLVQVSWAQN SEQKSSNRNF TLIVSKFENG
NGLYSVMVKD STKLSSNEMK FIKELRDDKS LEINDIVKEV KNKGGNEQDG TGLNILLMMS
LKESVTKLAE RFNIKAYTFE ELKEMRNGDP SFAASGIYSS EEVEVVETQE ELEIPFAVID
NVPTYPGCNE LEGNEDKKTC MSDKVSKYVS ANFNTSIAKP LGLTGVNRVF VSFRINKRGQ
VDNVEARASH PDIAEEARRV IYNLPQMKPG SQAGEEVGVL YSLPITFKIA E
//
