ID F4B2F6_DOKS4 Unreviewed; 596 AA.
AC F4B2F6;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Ribonucleoside-diphosphate reductase, alpha chain {ECO:0000313|EMBL:AEE19481.1};
DE EC=1.17.4.1 {ECO:0000313|EMBL:AEE19481.1};
GN OrderedLocusNames=Krodi_1498 {ECO:0000313|EMBL:AEE19481.1};
OS Dokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5)).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Dokdonia.
OX NCBI_TaxID=983548 {ECO:0000313|EMBL:AEE19481.1, ECO:0000313|Proteomes:UP000008290};
RN [1] {ECO:0000313|EMBL:AEE19481.1, ECO:0000313|Proteomes:UP000008290}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=4H-3-7-5 {ECO:0000313|EMBL:AEE19481.1,
RC ECO:0000313|Proteomes:UP000008290};
RX PubMed=21725025; DOI=10.1128/JB.05518-11;
RA Klippel B., Lochner A., Bruce D.C., Walston Davenport K., Detter C.,
RA Goodwin L.A., Han J., Han S., Hauser L., Land M.L., Nolan M.,
RA Ovchinnikova G., Pennacchio L., Pitluck S., Tapia R., Woyke T.,
RA Wiebusch S., Basner A., Abe F., Horikoshi K., Keller M., Antranikian G.;
RT "Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and
RT Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the
RT family Flavobacteriaceae.";
RL J. Bacteriol. 193:4545-4546(2011).
RN [2] {ECO:0000313|Proteomes:UP000008290}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=4H-3-7-5 {ECO:0000313|Proteomes:UP000008290};
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A.,
RA Antranikian F.I., Woyke T.;
RT "Complete sequence of Krokinobacter diaphorus 4H-3-7-5.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=4H-3-7-5;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Piela B., Lochner A.,
RA Antranikian F.I., Woyke T.;
RT "Complete sequence of Krokinobacter sp. 4H-3-7-5.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the ribonucleoside diphosphate reductase large
CC chain family. {ECO:0000256|ARBA:ARBA00010406}.
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DR EMBL; CP002528; AEE19481.1; -; Genomic_DNA.
DR RefSeq; WP_013750989.1; NC_015496.1.
DR AlphaFoldDB; F4B2F6; -.
DR STRING; 983548.Krodi_1498; -.
DR KEGG; kdi:Krodi_1498; -.
DR eggNOG; COG0209; Bacteria.
DR HOGENOM; CLU_000404_7_0_10; -.
DR OrthoDB; 9762933at2; -.
DR Proteomes; UP000008290; Chromosome.
DR GO; GO:0004748; F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor; IEA:UniProtKB-EC.
DR Gene3D; 3.20.70.20; -; 1.
DR InterPro; IPR013350; RNR_alpha.
DR InterPro; IPR000788; RNR_lg_C.
DR InterPro; IPR039718; Rrm1.
DR NCBIfam; TIGR02510; NrdE-prime; 1.
DR PANTHER; PTHR11573; RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN; 1.
DR PANTHER; PTHR11573:SF6; RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNIT; 1.
DR Pfam; PF02867; Ribonuc_red_lgC; 3.
DR PRINTS; PR01183; RIBORDTASEM1.
DR SUPFAM; SSF51998; PFL-like glycyl radical enzymes; 1.
PE 3: Inferred from homology;
KW Oxidoreductase {ECO:0000313|EMBL:AEE19481.1}.
FT DOMAIN 115..236
FT /note="Ribonucleotide reductase large subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF02867"
FT DOMAIN 241..419
FT /note="Ribonucleotide reductase large subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF02867"
FT DOMAIN 424..575
FT /note="Ribonucleotide reductase large subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF02867"
SQ SEQUENCE 596 AA; 67086 MW; 51874B09F30EBD57 CRC64;
MNDQELIKGQ VSATTAGKEN ELLTARKEAL SNKTESEGAG FKWLTENSRK FLGAGYLSPG
VSPEERIREV ADRAEQILGI PGFSDKFYGY MSEGFFSLAS PVWSNFGKER GLPISCFGSH
ISDDMGNILY TQSEVGMMSK LGGGTSGYFG KIRPRGADVK NNGQASGSVH IMQLFESMVD
VVSQGSVRRG RFSPYLPIEH ADIEEFLKIG TEGNSIQELT HGVTVTNEWM EEMIAGDSAK
RSLWAKVLQS RGEMGYPYIF FTDNANNGAA DVYKDNDHKI YASNLCTEIM LPSNDDWSFV
CVLSSVNVLH YDKWKNTDAV ETMVYFLDAV ITEFLEKLER YRDSDSREDR QTFLFMERAY
NFAKANRSLG LGVLGWHSLL QSRMLPFNSQ EAYNLNSEIF KAIKDKSYEA SEELAKTFGE
PEVLKGYGRR NATLNAVAPT TSSAFILGQV SQGIEPIWSN IYVKDIAKIK TTIKNPFLEE
LLEEKGMNTT EVWRSIRDMD GSVQHLEFLS ENEKDTFKTY SEIDQMDIIY QAANRQNHID
QGQSVNIIVH PEMPVKEINK IHVTAWKLGL KSLYYQHSMN AAQKFKQKKD CASCEA
//
