ID F4B3U6_ACIHW Unreviewed; 95 AA.
AC F4B3U6;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=Large ribosomal subunit protein eL42 {ECO:0000256|HAMAP-Rule:MF_01476};
GN Name=rpl44e {ECO:0000256|HAMAP-Rule:MF_01476};
GN OrderedLocusNames=Ahos_1250 {ECO:0000313|EMBL:AEE94133.1};
OS Acidianus hospitalis (strain W1).
OC Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae;
OC Acidianus.
OX NCBI_TaxID=933801 {ECO:0000313|EMBL:AEE94133.1, ECO:0000313|Proteomes:UP000008458};
RN [1] {ECO:0000313|EMBL:AEE94133.1, ECO:0000313|Proteomes:UP000008458}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=W1 {ECO:0000313|EMBL:AEE94133.1,
RC ECO:0000313|Proteomes:UP000008458};
RX PubMed=21607549; DOI=10.1007/s00792-011-0379-y;
RA You X.Y., Liu C., Wang S.Y., Jiang C.Y., Shah S.A., Prangishvili D.,
RA She Q., Liu S.J., Garrett R.A.;
RT "Genomic analysis of Acidianus hospitalis W1 a host for studying
RT crenarchaeal virus and plasmid life cycles.";
RL Extremophiles 15:487-497(2011).
RN [2]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=W1;
RA You X.Y., Liu C., Wang S.Y., Jiang C.Y., Shah S.A., Prangishvili D.,
RA Liu S.J., Garrett R.A.;
RT "Genomic analyses of Acidianus hospitalis W1 a host for studying
RT crenarchaeal virus and plasmid life cycles.";
RL Extremophiles 0:0-0(2011).
CC -!- FUNCTION: Binds to the 23S rRNA. {ECO:0000256|HAMAP-Rule:MF_01476}.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|HAMAP-Rule:MF_01476};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000256|HAMAP-Rule:MF_01476};
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC Rule:MF_01476}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL42 family.
CC {ECO:0000256|ARBA:ARBA00009364, ECO:0000256|HAMAP-Rule:MF_01476}.
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DR EMBL; CP002535; AEE94133.1; -; Genomic_DNA.
DR RefSeq; WP_013776049.1; NC_015518.1.
DR AlphaFoldDB; F4B3U6; -.
DR STRING; 933801.Ahos_1250; -.
DR GeneID; 42778302; -.
DR KEGG; aho:Ahos_1250; -.
DR eggNOG; arCOG04109; Archaea.
DR HOGENOM; CLU_114645_2_1_2; -.
DR OrthoDB; 52456at2157; -.
DR Proteomes; UP000008458; Chromosome.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0070180; F:large ribosomal subunit rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.10.450.80; -; 1.
DR HAMAP; MF_01476; Ribosomal_L44e; 1.
DR InterPro; IPR000552; Ribosomal_eL44.
DR InterPro; IPR011332; Ribosomal_zn-bd.
DR PANTHER; PTHR10369:SF3; 60S RIBOSOMAL PROTEIN L36A; 1.
DR PANTHER; PTHR10369; 60S RIBOSOMAL PROTEIN L36A/L44; 1.
DR Pfam; PF00935; Ribosomal_L44; 1.
DR SUPFAM; SSF57829; Zn-binding ribosomal proteins; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|HAMAP-Rule:MF_01476};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01476};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01476}; RNA-binding {ECO:0000256|HAMAP-Rule:MF_01476};
KW rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01476};
KW Zinc {ECO:0000256|HAMAP-Rule:MF_01476};
KW Zinc-finger {ECO:0000256|HAMAP-Rule:MF_01476}.
FT ZN_FING 11..74
FT /note="C4-type"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01476"
FT BINDING 11
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01476"
FT BINDING 14
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01476"
FT BINDING 71
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01476"
FT BINDING 74
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01476"
SQ SEQUENCE 95 AA; 10932 MW; 6992AFAA8234ABD4 CRC64;
MKVPKTITTY CPKCKTHTPH SVSLYKGGKR RTLAEGQRRY DRKNLGYGGQ RKPEQKRFAK
VTKKAVLMLK CTKCGYVIMK PGMRIKKMEI VEVAK
//
