ID F4GF38_ALIDK Unreviewed; 692 AA.
AC F4GF38;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=Ribonuclease II {ECO:0000313|EMBL:AEB86142.1};
GN OrderedLocusNames=Alide2_3817 {ECO:0000313|EMBL:AEB86142.1};
OS Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Alicycliphilus.
OX NCBI_TaxID=596154 {ECO:0000313|EMBL:AEB86142.1, ECO:0000313|Proteomes:UP000007938};
RN [1] {ECO:0000313|EMBL:AEB86142.1, ECO:0000313|Proteomes:UP000007938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14773 / CIP 107495 / K601
RC {ECO:0000313|Proteomes:UP000007938};
RX PubMed=21742888; DOI=10.1128/JB.00365-11;
RA Oosterkamp M.J., Veuskens T., Plugge C.M., Langenhoff A.A., Gerritse J.,
RA van Berkel W.J., Pieper D.H., Junca H., Goodwin L.A., Daligault H.E.,
RA Bruce D.C., Detter J.C., Tapia R., Han C.S., Land M.L., Hauser L.J.,
RA Smidt H., Stams A.J.;
RT "Genome Sequences of Alicycliphilus denitrificans Strains BC and K601T.";
RL J. Bacteriol. 193:5028-5029(2011).
RN [2] {ECO:0000313|EMBL:AEB86142.1, ECO:0000313|Proteomes:UP000007938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14773 / CIP 107495 / K601
RC {ECO:0000313|Proteomes:UP000007938};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Zeytun A., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Oosterkamp M.,
RA Pieper D., van Berkel W., Langenhoff A., Smidt H., Stams A., Woyke T.;
RT "Complete sequence of chromosome of Alicycliphilus denitrificans K601.";
RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002657; AEB86142.1; -; Genomic_DNA.
DR RefSeq; WP_013722907.1; NC_015422.1.
DR AlphaFoldDB; F4GF38; -.
DR STRING; 596154.Alide2_3817; -.
DR KEGG; adk:Alide2_3817; -.
DR eggNOG; COG0557; Bacteria.
DR HOGENOM; CLU_438650_0_0_4; -.
DR OrthoDB; 5288992at2; -.
DR Proteomes; UP000007938; Chromosome.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR001900; RNase_II/R.
DR PANTHER; PTHR23355:SF42; EXORIBONUCLEASE II, MITOCHONDRIAL; 1.
DR PANTHER; PTHR23355; RIBONUCLEASE; 1.
DR Pfam; PF00773; RNB; 2.
DR SMART; SM00955; RNB; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007938}.
FT DOMAIN 235..531
FT /note="Ribonuclease II/R"
FT /evidence="ECO:0000259|SMART:SM00955"
FT REGION 405..434
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 646..666
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 692 AA; 75019 MW; 253B779D058BAFED CRC64;
MHALFDDAGK FLAGRILSEA ESSAQIELDS GKRVKVKAAN ILLKFDKPAP AELLAQARET
AASIELPLAW EFAPEDEFGF ADLAREYFSA SAPVAEQAGM LLALYEAPHY FRRAGKGRFR
KAPAEILQQA LAAIEKKKQV QAQIEAWAGE LAAGRCPQPI REQLYKILFR PDKNAPEYKA
VVEASRTAHQ APLALLQAAG AIDSPYQFHW KRFLFENFPK GTGFPPLAAP QPPQDLPLAP
VQAYSIDDSA TTEIDDALSV QGLGTGTVTL GIHIAAPGLA IQPGGDLDKV GRQRLSTVYM
PGYKITMLPD EVVQIYTLDA GRANPAVSLY VTIDEATLAI TGTETRLERV PVTVNLRHDQ
LDHIVTEAWL QDASVQHENT PQPLLDLREQ LSFLHRLAKQ LKAGREQVRG KPETFNRPDY
NFRLEGNGKA EPTGSETVRI TTRQRGAPLD LIVAEAAIVA NSTWGQMLAE HGVPGIYRSQ
ASLAPGIKVR MGTKALPHAG IGVKSYAWAT SPLRRYVDLV NQWQIIACAR HGKTAALAAP
FKPKDAELFS IISSFDATYG AYNGYQAGME RFWTLKYLQQ NQVAELDATV IKDGMNGDFL
VRADTLPLVL PVLGAQGLPR GARVRVKLGA IDEITLDVNG TLLARLDDPA DQSDDGPVDE
DEEEAVAGPI AIAVDIDETD GTGTEAGAGQ PG
//
