ID F4KAQ2_ARATH Unreviewed; 174 AA.
AC F4KAQ2;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE SubName: Full=SAP domain-containing protein {ECO:0000313|EMBL:AED97753.1};
GN Name=LOT1 {ECO:0000313|TAIR:AT5G63460};
GN Synonyms=MLE2.9 {ECO:0000313|EMBL:AED97753.1}, MLE2_9
GN {ECO:0000313|EMBL:AED97753.1};
GN OrderedLocusNames=At5g63460 {ECO:0000313|Araport:AT5G63460,
GN ECO:0000313|EMBL:AED97753.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AED97753.1, ECO:0000313|Proteomes:UP000006548};
RN [1] {ECO:0000313|EMBL:AED97753.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130714; DOI=10.1038/35048507;
RG Kazusa DNA Research Institute;
RG Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG European Union Arabidopsis Genome Sequencing Consortium;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the DDA1 family.
CC {ECO:0000256|ARBA:ARBA00008042}.
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DR EMBL; CP002688; AED97753.1; -; Genomic_DNA.
DR RefSeq; NP_001190606.1; NM_001203677.1.
DR AlphaFoldDB; F4KAQ2; -.
DR SMR; F4KAQ2; -.
DR STRING; 3702.F4KAQ2; -.
DR PaxDb; 3702-AT5G63460-4; -.
DR ProteomicsDB; 217793; -.
DR EnsemblPlants; AT5G63460.4; AT5G63460.4; AT5G63460.
DR GeneID; 836465; -.
DR Gramene; AT5G63460.4; AT5G63460.4; AT5G63460.
DR KEGG; ath:AT5G63460; -.
DR Araport; AT5G63460; -.
DR TAIR; AT5G63460; LOT1.
DR eggNOG; ENOG502RZ5K; Eukaryota.
DR InParanoid; F4KAQ2; -.
DR OrthoDB; 316914at2759; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; F4KAQ2; baseline and differential.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
DR GO; GO:0031647; P:regulation of protein stability; IPI:TAIR.
DR GO; GO:0009414; P:response to water deprivation; IMP:TAIR.
DR Gene3D; 1.10.720.30; SAP domain; 1.
DR InterPro; IPR033575; DDA1.
DR InterPro; IPR018276; DDA1_N.
DR InterPro; IPR003034; SAP_dom.
DR InterPro; IPR036361; SAP_dom_sf.
DR PANTHER; PTHR31879; DET1- AND DDB1-ASSOCIATED PROTEIN 1; 1.
DR PANTHER; PTHR31879:SF2; DET1- AND DDB1-ASSOCIATED PROTEIN 1; 1.
DR Pfam; PF10172; DDA1; 1.
DR Pfam; PF02037; SAP; 1.
DR SMART; SM00513; SAP; 1.
DR SUPFAM; SSF68906; SAP domain; 1.
DR PROSITE; PS50800; SAP; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:F4KAQ2,
KW ECO:0007829|ProteomicsDB:F4KAQ2};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 140..174
FT /note="SAP"
FT /evidence="ECO:0000259|PROSITE:PS50800"
FT REGION 85..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 154..174
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 87..122
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 123..139
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 174 AA; 18907 MW; 0000A9039E201092 CRC64;
MEASSSQPSD SSDQTASKFL SDLPSRGFLS STVVSSNPGS LRVYICEHDT SPPVIGSLRI
ISFRIKGQLI KTNQQNILIR SLLLKKQKGE SSSKDSKGTA EDGPKKRAAN RALDDRSSAK
RAANASRQEG SSSRTGERDF QSLTVEKLRA MLKEKGLPTK GRKDELIARL KSAN
//
