ID F4L8D8_HALH1 Unreviewed; 295 AA.
AC F4L8D8;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEE54646.1};
GN OrderedLocusNames=Halhy_6836 {ECO:0000313|EMBL:AEE54646.1};
OS Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O).
OG Plasmid pHALHY03 {ECO:0000313|EMBL:AEE54646.1,
OG ECO:0000313|Proteomes:UP000008461}.
OC Bacteria; Bacteroidota; Saprospiria; Saprospirales; Haliscomenobacteraceae;
OC Haliscomenobacter.
OX NCBI_TaxID=760192 {ECO:0000313|EMBL:AEE54646.1, ECO:0000313|Proteomes:UP000008461};
RN [1] {ECO:0000313|EMBL:AEE54646.1, ECO:0000313|Proteomes:UP000008461}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27775 / DSM 1100 / LMG 10767 / O
RC {ECO:0000313|Proteomes:UP000008461};
RC PLASMID=Plasmid pHALHY03 {ECO:0000313|Proteomes:UP000008461};
RX PubMed=21886862; DOI=10.4056/sigs.1964579;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Daligault H., Lapidus A., Zeytun A., Nolan M., Lucas S., Del Rio T.G.,
RA Tice H., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K.,
RA Pagani I., Ivanova N., Huntemann M., Mavromatis K., Mikhailova N., Pati A.,
RA Chen A., Palaniappan K., Land M., Hauser L., Brambilla E.M., Rohde M.,
RA Verbarg S., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Kyrpides N.C., Klenk H.P., Woyke T.;
RT "Complete genome sequence of Haliscomenobacter hydrossis type strain (O).";
RL Stand. Genomic Sci. 4:352-360(2011).
RN [2]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=DSM 1100;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L.,
RA Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Pagani I.,
RA Daligault H., Detter J.C., Han C., Land M., Hauser L., Markowitz V.,
RA Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Verbarg S., Frueling A.,
RA Brambilla E., Klenk H.-P., Eisen J.A.;
RT "Complete sequence of plasmid 3 of Haliscomenobacter hydrossis DSM 1100.";
RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002694; AEE54646.1; -; Genomic_DNA.
DR RefSeq; WP_013769162.1; NC_015513.1.
DR AlphaFoldDB; F4L8D8; -.
DR GeneID; 78196343; -.
DR KEGG; hhy:Halhy_6836; -.
DR eggNOG; COG1917; Bacteria.
DR eggNOG; COG2207; Bacteria.
DR HOGENOM; CLU_000445_88_2_10; -.
DR OrthoDB; 2585681at2; -.
DR Proteomes; UP000008461; Plasmid pHALHY03.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR003313; AraC-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR037923; HTH-like.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43280:SF2; BIFUNCTIONAL TRANSCRIPTIONAL ACTIVATOR_DNA REPAIR ENZYME ADAA; 1.
DR Pfam; PF02311; AraC_binding; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF51215; Regulatory protein AraC; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:AEE54646.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000008461}.
FT DOMAIN 189..287
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 295 AA; 35120 MW; 55E6152C531C2D39 CRC64;
MMKDIFQMYN IGHFINQPHN PTEFEILRFD EMAEPNVDDF HKHSFYEILW TEKGKSRQII
DYNEYEVKPN SLFFISPNQV HHFEEWKPLS GGTILFTEDF YLLNRSNKDT LFELSFLDNL
YSNPCIEFTK KSFADVSNLI YQIEAEQKRK DRNTSIIQAY LQILLAQVQR HIDTTNPTIV
SKKYLIQFKQ FKQVLEDHFW ENKTANYYAE QLHITQHHLN LICKAITNNT ATDIIRARSI
LEAKRLLTFT DKSIAEIAFE LNFSDGSYFA KTFKSFTNHT PQDFRSKMSE KYRTR
//
