ID F4NTA9_BATDJ Unreviewed; 695 AA.
AC F4NTA9;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 08-NOV-2023, entry version 38.
DE RecName: Full=NFACT RNA-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=BATDEDRAFT_8510 {ECO:0000313|EMBL:EGF84317.1};
OS Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) (Frog chytrid
OS fungus).
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Chytridiomycetes; Rhizophydiales;
OC Rhizophydiales incertae sedis; Batrachochytrium.
OX NCBI_TaxID=684364 {ECO:0000313|EMBL:EGF84317.1, ECO:0000313|Proteomes:UP000007241};
RN [1] {ECO:0000313|EMBL:EGF84317.1, ECO:0000313|Proteomes:UP000007241}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JAM81 / FGSC 10211 {ECO:0000313|Proteomes:UP000007241};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Kuo A., Salamov A., Schmutz J., Lucas S., Pitluck S., Rosenblum E.,
RA Stajich J., Eisen M., Grigoriev I.V.;
RT "The draft genome of Batrachochytrium dendrobatidis.";
RL Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NEMF family.
CC {ECO:0000256|ARBA:ARBA00008318}.
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DR EMBL; GL882879; EGF84317.1; -; Genomic_DNA.
DR RefSeq; XP_006675014.1; XM_006674951.1.
DR AlphaFoldDB; F4NTA9; -.
DR STRING; 684364.F4NTA9; -.
DR GeneID; 18241945; -.
DR HOGENOM; CLU_003612_2_0_1; -.
DR InParanoid; F4NTA9; -.
DR OMA; MVYGKRN; -.
DR OrthoDB; 129892at2759; -.
DR Proteomes; UP000007241; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:1990112; C:RQC complex; IBA:GO_Central.
DR GO; GO:0043023; F:ribosomal large subunit binding; IBA:GO_Central.
DR GO; GO:0000049; F:tRNA binding; IBA:GO_Central.
DR GO; GO:0072344; P:rescue of stalled ribosome; IBA:GO_Central.
DR GO; GO:1990116; P:ribosome-associated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR InterPro; IPR021846; NFACT-C.
DR InterPro; IPR008532; NFACT_RNA-bd.
DR PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR PANTHER; PTHR15239:SF6; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR Pfam; PF11923; NFACT-C; 1.
DR Pfam; PF05670; NFACT-R_1; 1.
DR Pfam; PF05833; NFACT_N; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000007241}.
FT DOMAIN 447..552
FT /note="NFACT RNA-binding"
FT /evidence="ECO:0000259|Pfam:PF05670"
FT DOMAIN 582..674
FT /note="NFACT protein C-terminal"
FT /evidence="ECO:0000259|Pfam:PF11923"
FT COILED 273..310
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 695 AA; 78307 MW; 177016A19B8423E6 CRC64;
MKQRFSALDV SASVVELKTR LVGLRLQNVY DINSKTYLFK FSRNETKELL LIESGIRMHT
TQFSRDKSQM PSGFCMKLRK HLRTRRLVNL RQLGADRIMD MQFSEGEYAF HIIVEFYSSG
NIILTDHEYR ILSVLRTVEY EVSTPAVNDA NIADVQDSTS LDLYRISTDS SSFLALLNAL
KQGDDILSSS IDTPQQGYIV TSDSMVSQQL ASSDTAQSSP TTTFTTYQEF HPYRFEQFNQ
DRSTSLSAEL PKQTRFMEFV SFDKAVDEYF SKMESQRLEI RAHQAELAAV KKLENVKKSH
QAQIQNFQSN VESNEQYAQA IESRLEDIDS VLRTVQSFLA SGMDWKDLED LVKEETNNGN
ALAKMIIGFK LNMEFFKIDL DIYSTAYANA RRYYGAKKVA ITKQSKTMEQ SAKVVKMAEM
KIFQHLASVQ KTAVSITKIR KPYWFEKFLW FVSSENFLVV GGKDATQSNM LVTRYLKKGD
AYVHSDLPGA ASVIVKCMQS CVGTDAGTMS VCQSRAWDAK IITSAYWAEA HQVSKTTSTG
DTLPLGTFMI RGKKNWLPPV QLIYGMAMLF QTDHSYDEQA IDMSFLDLLT GQPHETDNLL
YAIPVCAPWT ALQKYKYKVK LLPGALKRGK AAKSITASFL SMAAANESVA EKELIKAVPD
ADWISTVLGK VKVVVSAADQ VQIKKHGNGS KRGNK
//