ID F4P9G3_BATDJ Unreviewed; 803 AA.
AC F4P9G3;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 69.
DE RecName: Full=Eukaryotic translation initiation factor 3 subunit C {ECO:0000256|HAMAP-Rule:MF_03002};
DE Short=eIF3c {ECO:0000256|HAMAP-Rule:MF_03002};
DE AltName: Full=Eukaryotic translation initiation factor 3 93 kDa subunit homolog {ECO:0000256|HAMAP-Rule:MF_03002};
DE Short=eIF3 p93 {ECO:0000256|HAMAP-Rule:MF_03002};
DE AltName: Full=Translation initiation factor eIF3, p93 subunit homolog {ECO:0000256|HAMAP-Rule:MF_03002};
GN Name=NIP1 {ECO:0000256|HAMAP-Rule:MF_03002};
GN ORFNames=BATDEDRAFT_13212 {ECO:0000313|EMBL:EGF78398.1};
OS Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) (Frog chytrid
OS fungus).
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Chytridiomycetes; Rhizophydiales;
OC Rhizophydiales incertae sedis; Batrachochytrium.
OX NCBI_TaxID=684364 {ECO:0000313|EMBL:EGF78398.1, ECO:0000313|Proteomes:UP000007241};
RN [1] {ECO:0000313|EMBL:EGF78398.1, ECO:0000313|Proteomes:UP000007241}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JAM81 / FGSC 10211 {ECO:0000313|Proteomes:UP000007241};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Kuo A., Salamov A., Schmutz J., Lucas S., Pitluck S., Rosenblum E.,
RA Stajich J., Eisen M., Grigoriev I.V.;
RT "The draft genome of Batrachochytrium dendrobatidis.";
RL Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the eukaryotic translation initiation factor 3
CC (eIF-3) complex, which is involved in protein synthesis of a
CC specialized repertoire of mRNAs and, together with other initiation
CC factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S
CC ribosome. The eIF-3 complex specifically targets and initiates
CC translation of a subset of mRNAs involved in cell proliferation.
CC {ECO:0000256|HAMAP-Rule:MF_03002}.
CC -!- SUBUNIT: Component of the eukaryotic translation initiation factor 3
CC (eIF-3) complex. {ECO:0000256|HAMAP-Rule:MF_03002}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_03002}.
CC -!- SIMILARITY: Belongs to the eIF-3 subunit C family. {ECO:0000256|HAMAP-
CC Rule:MF_03002}.
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DR EMBL; GL882889; EGF78398.1; -; Genomic_DNA.
DR RefSeq; XP_006680982.1; XM_006680919.1.
DR AlphaFoldDB; F4P9G3; -.
DR STRING; 684364.F4P9G3; -.
DR GeneID; 18236778; -.
DR HOGENOM; CLU_004304_0_2_1; -.
DR InParanoid; F4P9G3; -.
DR OMA; FRCGLIK; -.
DR OrthoDB; 5482362at2759; -.
DR Proteomes; UP000007241; Unassembled WGS sequence.
DR GO; GO:0016282; C:eukaryotic 43S preinitiation complex; IEA:UniProtKB-UniRule.
DR GO; GO:0033290; C:eukaryotic 48S preinitiation complex; IEA:UniProtKB-UniRule.
DR GO; GO:0005852; C:eukaryotic translation initiation factor 3 complex; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR GO; GO:0031369; F:translation initiation factor binding; IBA:GO_Central.
DR GO; GO:0001732; P:formation of cytoplasmic translation initiation complex; IEA:UniProtKB-UniRule.
DR GO; GO:0006413; P:translational initiation; IBA:GO_Central.
DR HAMAP; MF_03002; eIF3c; 1.
DR InterPro; IPR027516; EIF3C.
DR InterPro; IPR008905; EIF3C_N_dom.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR13937; EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED; 1.
DR PANTHER; PTHR13937:SF0; EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C-RELATED; 1.
DR Pfam; PF05470; eIF-3c_N; 1.
DR Pfam; PF01399; PCI; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_03002};
KW Initiation factor {ECO:0000256|ARBA:ARBA00022540, ECO:0000256|HAMAP-
KW Rule:MF_03002};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917, ECO:0000256|HAMAP-
KW Rule:MF_03002}; Reference proteome {ECO:0000313|Proteomes:UP000007241}.
FT DOMAIN 542..714
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 759..803
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 110..156
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 803 AA; 90214 MW; 426D2BB177F818AF CRC64;
MDDDSDGDSV DSDDSDAKKT IRSARDKKFG EMRSAVAAMH SAKKSSDWIS IQNEFDRLIK
AIIKSNAIIQ QEGLPRFVSR SLVQIDDFIK NSLSSKESTK KMNATIAKAL NAMKQKIKKT
TKTYEQQIAE FRAAPVDEEE SEAEAEEAIK STLKARDARR IEKEAEGKGE PTGSGNESFT
LVGKGGKLID LSPEGLFTKL TEVLEARGKK STDKLAQVET LMQLLEIAVT PYQKIRVLTA
LIPARFDYVP ISGFMSSSMW NKALEEIKDL VRLLDENPHI TLSLNVIEED PDQDTVPEHI
RDRHITAGQS VVLPGHITSF VDRLDDEFTK SLQSIDPHST EYIDRLRDET TLYASIVCAV
KYAEVTKASS ENIDLMTMRR VEHLYNKPDV VIKTVEDSVR KVYPELVKIL ESPVDLVSVL
CRGLYKSSIG RIRTRALLCH VYHLALHDHY HEARDMILMS HVQETISQTD IHMQVLFNRT
MVQIGLCAFR AGLFRDAATA LQDIASSGKT RELLAQGIQQ PKYAAEKTAE QERMERQRQL
PFHMHVNLEL LECVYLVSSM LLEVPNMALH AHESRRKVTS KAFRRMLDFN DRQIFIGPPE
NVRDHIMAAA KSMAAGDWKS CRDYINHIKI WDLLSNAEKA KETLAKSIQE ESLRTYIFTY
APYYESMGLS SLAELFELEV SRVNAIVSKM TTSEELHASL DPQSGHIIFH RPAPGIEMSR
LEFMAGVYAD KVASLVDSNE KLLEARSVTL GLQEQREYMQ HREQQGGHRG GRVGGSGRHT
GGSSSHRGGS AGSGFRFRTA VGK
//