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Database: UniProt
Entry: F4RIV0_MELLP
LinkDB: F4RIV0_MELLP
Original site: F4RIV0_MELLP 
ID   F4RIV0_MELLP            Unreviewed;      1216 AA.
AC   F4RIV0;
DT   28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT   28-JUN-2011, sequence version 1.
DT   24-JAN-2024, entry version 50.
DE   RecName: Full=DNA damage-binding protein 1 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=MELLADRAFT_105631 {ECO:0000313|EMBL:EGG07768.1};
OS   Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) (Poplar leaf
OS   rust fungus).
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC   Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora.
OX   NCBI_TaxID=747676 {ECO:0000313|Proteomes:UP000001072};
RN   [1] {ECO:0000313|Proteomes:UP000001072}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=98AG31 / pathotype 3-4-7 {ECO:0000313|Proteomes:UP000001072};
RX   PubMed=21536894; DOI=10.1073/pnas.1019315108;
RA   Duplessis S., Cuomo C.A., Lin Y.-C., Aerts A., Tisserant E.,
RA   Veneault-Fourrey C., Joly D.L., Hacquard S., Amselem J., Cantarel B.L.,
RA   Chiu R., Coutinho P.M., Feau N., Field M., Frey P., Gelhaye E.,
RA   Goldberg J., Grabherr M.G., Kodira C.D., Kohler A., Kuees U.,
RA   Lindquist E.A., Lucas S.M., Mago R., Mauceli E., Morin E., Murat C.,
RA   Pangilinan J.L., Park R., Pearson M., Quesneville H., Rouhier N.,
RA   Sakthikumar S., Salamov A.A., Schmutz J., Selles B., Shapiro H.,
RA   Tanguay P., Tuskan G.A., Henrissat B., Van de Peer Y., Rouze P.,
RA   Ellis J.G., Dodds P.N., Schein J.E., Zhong S., Hamelin R.C.,
RA   Grigoriev I.V., Szabo L.J., Martin F.;
RT   "Obligate biotrophy features unraveled by the genomic analysis of rust
RT   fungi.";
RL   Proc. Natl. Acad. Sci. U.S.A. 108:9166-9171(2011).
CC   -!- SIMILARITY: Belongs to the DDB1 family.
CC       {ECO:0000256|ARBA:ARBA00007453}.
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DR   EMBL; GL883103; EGG07768.1; -; Genomic_DNA.
DR   RefSeq; XP_007409100.1; XM_007409038.1.
DR   AlphaFoldDB; F4RIV0; -.
DR   STRING; 747676.F4RIV0; -.
DR   EnsemblFungi; EGG07768; EGG07768; MELLADRAFT_105631.
DR   GeneID; 18922672; -.
DR   KEGG; mlr:MELLADRAFT_105631; -.
DR   VEuPathDB; FungiDB:MELLADRAFT_105631; -.
DR   eggNOG; KOG1897; Eukaryota.
DR   HOGENOM; CLU_002893_0_1_1; -.
DR   InParanoid; F4RIV0; -.
DR   OrthoDB; 226997at2759; -.
DR   Proteomes; UP000001072; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   Gene3D; 1.10.150.910; -; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   PANTHER; PTHR10644:SF3; DNA DAMAGE-BINDING PROTEIN 1; 1.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
DR   SUPFAM; SSF101898; NHL repeat; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001072}.
FT   DOMAIN          75..614
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          828..1186
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
FT   REGION          146..181
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          288..308
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1036..1060
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        290..308
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1043..1059
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1216 AA;  134913 MW;  9910B939D7FF17AF CRC64;
     MLYVGHAQLP TSVRHAIKCS FLEPHSQSLI LCKPSQLEIY AIEPDQLNLL HTLPVFGLID
     HIQSYIKQPN QTATLLVLTS ELNLFTLRYC PQSKSVITTA TISLNQPGAR PADYLQTSIV
     DPHSRCLVLH ALNGILHLIP LEPSSKPKPK HLEPSLGGRR KRSTISLKSN HPPNPDLDTN
     IDPDSELYQI VQLRLNEVNV HALDFAALPA HLPPTLLILY SNHMGQRVLR SRSIDLITAN
     CDQDICPNHL CPDLDTSLII PIPDDQGSVL LVGEDSVELV YLTDRLPNPT GKGKSRDRSV
     DSRTGATRAP ESDKLLKHVT SINIPLGSYT CFCKVEDQPD VWLIGDLYGH VLVIRLERPE
     GGKPLLRYQQ AGQVSSPEAL VYISDRFIYL ASHYGDSQLL RISALDSALA QDCQPEVVAN
     YPNLAPISDV CVVDQSEGFD HQLVTCSGAY QDGSLRIITH GITLTDLGML PIAGAEHIWS
     IDTPHSPQVT LIVGFRNETR FLIIENDQFS QDVEELDSFS GFKSDRRTIL AGQIISQGHH
     VQAFPIQVTQ EEVIVGEMFR WEPTSNDLIT VAAIGASLTV VALQREVLLL HVKDNLLVQS
     ESIRFPNEVS CLAIDPSQKV LAVGQWISNS IALVSLDQMN VSTTIETGSD FGVHSVLFTN
     FGEGIDPHLL AGMDDGELIS IKLQGLENGS LVQEQSRRTV VLGHRPITMS RIVLDIPTDQ
     QLGKPAVWIH SEHPTLMIEV DGRLKYRPVA LGDATDAIKI GTRGVGVVTS EGIRLGRIDS
     LEKIHISKIP LGGEQPKRIA HSKSMRAYGV VCVSQKVNQQ TGELDKGSSV KIIDDVTFEL
     LFDFQLLSIE QGTSIAAIEL GKDLIEDFII GTGFVNPNES QSNTGRILTI GLSSKHDQEG
     NLREFKLKRM TKVKGTVHGL GGLPGGKFVA SANAFVHAFG INEEEEDEGF EVLDTWGGGF
     VSQTVLTEKN WIIVGDLYKS IVVLEFDLKK FSLKVLGRDY SAMSVRPIGM ISDRVFVAAD
     TEFNLFTVEM RERQKGLKEE DEDEEGLSVE EEKGDDDEWE EEERRMRVEK VFNDDHLDTV
     GGFHLGENVN HFKAGSLVKS LKHFYGQDLK YGGKLIFVSS TGGIGVIIKL EDLKIYKHLK
     ALEDRLKKEI LSIGGLDSTE FRKFKNKWKK VDGCEFLDGD LIQRLYNDSF KRKSLIKEDQ
     DEVGIDEVVE ELSWFH
//
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