ID F4RIV0_MELLP Unreviewed; 1216 AA.
AC F4RIV0;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE RecName: Full=DNA damage-binding protein 1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=MELLADRAFT_105631 {ECO:0000313|EMBL:EGG07768.1};
OS Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) (Poplar leaf
OS rust fungus).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora.
OX NCBI_TaxID=747676 {ECO:0000313|Proteomes:UP000001072};
RN [1] {ECO:0000313|Proteomes:UP000001072}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=98AG31 / pathotype 3-4-7 {ECO:0000313|Proteomes:UP000001072};
RX PubMed=21536894; DOI=10.1073/pnas.1019315108;
RA Duplessis S., Cuomo C.A., Lin Y.-C., Aerts A., Tisserant E.,
RA Veneault-Fourrey C., Joly D.L., Hacquard S., Amselem J., Cantarel B.L.,
RA Chiu R., Coutinho P.M., Feau N., Field M., Frey P., Gelhaye E.,
RA Goldberg J., Grabherr M.G., Kodira C.D., Kohler A., Kuees U.,
RA Lindquist E.A., Lucas S.M., Mago R., Mauceli E., Morin E., Murat C.,
RA Pangilinan J.L., Park R., Pearson M., Quesneville H., Rouhier N.,
RA Sakthikumar S., Salamov A.A., Schmutz J., Selles B., Shapiro H.,
RA Tanguay P., Tuskan G.A., Henrissat B., Van de Peer Y., Rouze P.,
RA Ellis J.G., Dodds P.N., Schein J.E., Zhong S., Hamelin R.C.,
RA Grigoriev I.V., Szabo L.J., Martin F.;
RT "Obligate biotrophy features unraveled by the genomic analysis of rust
RT fungi.";
RL Proc. Natl. Acad. Sci. U.S.A. 108:9166-9171(2011).
CC -!- SIMILARITY: Belongs to the DDB1 family.
CC {ECO:0000256|ARBA:ARBA00007453}.
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DR EMBL; GL883103; EGG07768.1; -; Genomic_DNA.
DR RefSeq; XP_007409100.1; XM_007409038.1.
DR AlphaFoldDB; F4RIV0; -.
DR STRING; 747676.F4RIV0; -.
DR EnsemblFungi; EGG07768; EGG07768; MELLADRAFT_105631.
DR GeneID; 18922672; -.
DR KEGG; mlr:MELLADRAFT_105631; -.
DR VEuPathDB; FungiDB:MELLADRAFT_105631; -.
DR eggNOG; KOG1897; Eukaryota.
DR HOGENOM; CLU_002893_0_1_1; -.
DR InParanoid; F4RIV0; -.
DR OrthoDB; 226997at2759; -.
DR Proteomes; UP000001072; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 1.10.150.910; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR10644:SF3; DNA DAMAGE-BINDING PROTEIN 1; 1.
DR PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR Pfam; PF03178; CPSF_A; 1.
DR Pfam; PF10433; MMS1_N; 1.
DR SUPFAM; SSF101898; NHL repeat; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000001072}.
FT DOMAIN 75..614
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10433"
FT DOMAIN 828..1186
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03178"
FT REGION 146..181
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 288..308
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1036..1060
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 290..308
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1043..1059
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1216 AA; 134913 MW; 9910B939D7FF17AF CRC64;
MLYVGHAQLP TSVRHAIKCS FLEPHSQSLI LCKPSQLEIY AIEPDQLNLL HTLPVFGLID
HIQSYIKQPN QTATLLVLTS ELNLFTLRYC PQSKSVITTA TISLNQPGAR PADYLQTSIV
DPHSRCLVLH ALNGILHLIP LEPSSKPKPK HLEPSLGGRR KRSTISLKSN HPPNPDLDTN
IDPDSELYQI VQLRLNEVNV HALDFAALPA HLPPTLLILY SNHMGQRVLR SRSIDLITAN
CDQDICPNHL CPDLDTSLII PIPDDQGSVL LVGEDSVELV YLTDRLPNPT GKGKSRDRSV
DSRTGATRAP ESDKLLKHVT SINIPLGSYT CFCKVEDQPD VWLIGDLYGH VLVIRLERPE
GGKPLLRYQQ AGQVSSPEAL VYISDRFIYL ASHYGDSQLL RISALDSALA QDCQPEVVAN
YPNLAPISDV CVVDQSEGFD HQLVTCSGAY QDGSLRIITH GITLTDLGML PIAGAEHIWS
IDTPHSPQVT LIVGFRNETR FLIIENDQFS QDVEELDSFS GFKSDRRTIL AGQIISQGHH
VQAFPIQVTQ EEVIVGEMFR WEPTSNDLIT VAAIGASLTV VALQREVLLL HVKDNLLVQS
ESIRFPNEVS CLAIDPSQKV LAVGQWISNS IALVSLDQMN VSTTIETGSD FGVHSVLFTN
FGEGIDPHLL AGMDDGELIS IKLQGLENGS LVQEQSRRTV VLGHRPITMS RIVLDIPTDQ
QLGKPAVWIH SEHPTLMIEV DGRLKYRPVA LGDATDAIKI GTRGVGVVTS EGIRLGRIDS
LEKIHISKIP LGGEQPKRIA HSKSMRAYGV VCVSQKVNQQ TGELDKGSSV KIIDDVTFEL
LFDFQLLSIE QGTSIAAIEL GKDLIEDFII GTGFVNPNES QSNTGRILTI GLSSKHDQEG
NLREFKLKRM TKVKGTVHGL GGLPGGKFVA SANAFVHAFG INEEEEDEGF EVLDTWGGGF
VSQTVLTEKN WIIVGDLYKS IVVLEFDLKK FSLKVLGRDY SAMSVRPIGM ISDRVFVAAD
TEFNLFTVEM RERQKGLKEE DEDEEGLSVE EEKGDDDEWE EEERRMRVEK VFNDDHLDTV
GGFHLGENVN HFKAGSLVKS LKHFYGQDLK YGGKLIFVSS TGGIGVIIKL EDLKIYKHLK
ALEDRLKKEI LSIGGLDSTE FRKFKNKWKK VDGCEFLDGD LIQRLYNDSF KRKSLIKEDQ
DEVGIDEVVE ELSWFH
//