ID F4WGW5_ACREC Unreviewed; 899 AA.
AC F4WGW5;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 24-JAN-2024, entry version 42.
DE SubName: Full=Transcription initiation factor TFIID subunit 4 {ECO:0000313|EMBL:EGI66584.1};
GN ORFNames=G5I_04916 {ECO:0000313|EMBL:EGI66584.1};
OS Acromyrmex echinatior (Panamanian leafcutter ant) (Acromyrmex octospinosus
OS echinatior).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Myrmicinae; Acromyrmex.
OX NCBI_TaxID=103372 {ECO:0000313|Proteomes:UP000007755};
RN [1] {ECO:0000313|EMBL:EGI66584.1}
RP NUCLEOTIDE SEQUENCE.
RA Nygaard S., Zhang G.;
RT "The genome of the leaf-cutting ant Acromyrmex echinatior suggests key
RT adaptations to social evolution and fungus farming.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF4 family.
CC {ECO:0000256|ARBA:ARBA00006178}.
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DR EMBL; GL888147; EGI66584.1; -; Genomic_DNA.
DR AlphaFoldDB; F4WGW5; -.
DR STRING; 103372.F4WGW5; -.
DR eggNOG; KOG2341; Eukaryota.
DR InParanoid; F4WGW5; -.
DR Proteomes; UP000007755; Unassembled WGS sequence.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR GO; GO:0006366; P:transcription by RNA polymerase II; IEA:UniProt.
DR CDD; cd08045; TAF4; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR Gene3D; 1.20.120.1110; TAFH/NHR1 domain; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR045144; TAF4.
DR InterPro; IPR007900; TAF4_C.
DR InterPro; IPR037249; TAFH/NHR1_dom_sf.
DR InterPro; IPR003894; TAFH_NHR1.
DR PANTHER; PTHR15138; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR PANTHER; PTHR15138:SF14; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR Pfam; PF05236; TAF4; 1.
DR Pfam; PF07531; TAFH; 1.
DR SMART; SM00549; TAFH; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
DR SUPFAM; SSF158553; TAFH domain-like; 1.
DR PROSITE; PS51119; TAFH; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:EGI66584.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:EGI66584.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007755};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 454..550
FT /note="TAFH"
FT /evidence="ECO:0000259|PROSITE:PS51119"
FT REGION 120..144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 415..457
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 831..864
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 415..454
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 841..860
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 899 AA; 95596 MW; 5DCEE1ED270A576E CRC64;
MASAKFLEEA LSTDVDESAV NAIVGSLETQ LVTSTPTVAG HQASSASVSQ QNHQVNSAIS
NGGTITAVQP QKHGVSNGGG ATTVNSLMTQ EVTKSITTST LLPVNVVTSN TVAPQVITTQ
QQPPPQVQPQ QQQQHTQPPG ISPATYINQV TTNQVSSNQT THLPSLTKTH EPVKLIYPTV
GQVIATTGVA NANNKLSFPA QTVGQLANGT LGITSQAVLQ TTANVVTNVG SVSQAGSQTV
TAVNKPTGAA LVIKTSVAPG MVSVPMSVPV SVAGNTVSTA LQAKGGVTST IVPSNVQILN
VNTMRPATPV AGQQANKQVT PRVVIGQHQL VGARAGGPGI TLQALHSLQA GAQGHLLLKT
ENGQYQLLRV GPAPTAGTPT GTAVTPNSIT GNAVVAAPSP GTTYRLTSVP TTVAPTITTS
TTTPGTVTTA PTTTSTPTAT TVQTAQTSTP RQTTDNTKEK CRKFLANLLE LSSREPKAVE
RNVRTLIQEL IDTKVEPEEF CDRLEKLLNA SPQPCLIGFL KKSLPLLRQS LVTKELVIEG
IKPPPANVVF SIASAVVPTI TVRPVTTVVR SPTAAYTVKS TVATTGIRPT APVVQKPPII
TTTVVKPITT TQGKTLNTTT TVNKAVVPSL VQKPAAKEKE KKTFSSAGYT ADDDINDVAA
MGGVNLAEES QRILGSTEFV GTQIRSCKDE VFLHMTSLQQ RIKQIASSHG LEEPNQEVAA
LISHAVQERL KNLVEKLAVI TEHRIDLIKV DPRYEVTQDV RGQLKFLEDL DRIERRKHEE
QERELLLRAA KSRAKTEDPK QAELKAKAKE MQRVEMEQLR TRDANITALQ AIGPRKKPKL
DTAGSTNSTP SANASVSGLN RQMPMRPRLK RVNFRDLIFL LEQEKETCRS TTLYKSYLK
//
