ID F4XCC3_9FIRM Unreviewed; 279 AA.
AC F4XCC3;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=PRD domain-containing protein {ECO:0000259|PROSITE:PS51372};
GN ORFNames=HMPREF0866_01195 {ECO:0000313|EMBL:EGJ48234.1};
OS Ruminococcaceae bacterium D16.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae.
OX NCBI_TaxID=552398 {ECO:0000313|EMBL:EGJ48234.1, ECO:0000313|Proteomes:UP000002801};
RN [1] {ECO:0000313|Proteomes:UP000002801}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D16 {ECO:0000313|Proteomes:UP000002801};
RG The Broad Institute Genome Sequencing Platform;
RA Ward D., Earl A., Feldgarden M., Gevers D., Young S., Zeng Q., Koehrsen M.,
RA Alvarado L., Berlin A.M., Borenstein D., Chapman S.B., Chen Z., Engels R.,
RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E.R.,
RA Heiman D.I., Hepburn T.A., Howarth C., Jen D., Larson L., Mehta T.,
RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D.,
RA Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., Yandava C.,
RA Sibley C.D., White A.P., Crowley S., Surette M.G., Strauss J.C.,
RA Ambrose C.E., Allen-Vercoe E., Haas B., Nusbaum C., Birren B.;
RT "The Genome Sequence of Clostridium sp. D5.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EGJ48234.1, ECO:0000313|Proteomes:UP000002801}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D16 {ECO:0000313|EMBL:EGJ48234.1,
RC ECO:0000313|Proteomes:UP000002801};
RG The Broad Institute Genomics Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Sibley C.D., White A.P.,
RA Crowley S., Surette M.G., Strauss J.C., Ambrose C.E., Allen-Vercoe E.,
RA Walker B., Young S., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Allen A.W., Alvarado L., Arachchi H.M., Berlin A.M.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sisk P.,
RA Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Ruminococcaceae bacterium D16.";
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGJ48234.1}.
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DR EMBL; ADDX02000002; EGJ48234.1; -; Genomic_DNA.
DR AlphaFoldDB; F4XCC3; -.
DR STRING; 552398.HMPREF0866_01195; -.
DR eggNOG; COG3711; Bacteria.
DR HOGENOM; CLU_078802_0_0_9; -.
DR OrthoDB; 9813552at2; -.
DR Proteomes; UP000002801; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.20.58.1950; -; 1.
DR Gene3D; 1.20.890.100; -; 1.
DR Gene3D; 2.30.24.10; CAT RNA-binding domain; 1.
DR Gene3D; 1.10.1790.10; PRD domain; 1.
DR InterPro; IPR004341; CAT_RNA-bd_dom.
DR InterPro; IPR036650; CAT_RNA-bd_dom_sf.
DR InterPro; IPR011608; PRD.
DR InterPro; IPR036634; PRD_sf.
DR PANTHER; PTHR30185; CRYPTIC BETA-GLUCOSIDE BGL OPERON ANTITERMINATOR; 1.
DR PANTHER; PTHR30185:SF15; CRYPTIC BETA-GLUCOSIDE BGL OPERON ANTITERMINATOR; 1.
DR Pfam; PF03123; CAT_RBD; 1.
DR Pfam; PF00874; PRD; 2.
DR SMART; SM01061; CAT_RBD; 1.
DR SUPFAM; SSF63520; PTS-regulatory domain, PRD; 2.
DR SUPFAM; SSF50151; SacY-like RNA-binding domain; 1.
DR PROSITE; PS51372; PRD_2; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002801};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 67..171
FT /note="PRD"
FT /evidence="ECO:0000259|PROSITE:PS51372"
FT DOMAIN 172..278
FT /note="PRD"
FT /evidence="ECO:0000259|PROSITE:PS51372"
SQ SEQUENCE 279 AA; 31083 MW; 25285EEEE51551E9 CRC64;
MYRITKVLNH NAVLAQNLDD RQENLVVGKG AGFGRKPGER VDFSGEVTVY QLSQKCDRGN
PRELVKRIDP IYLSIANSII LDARKTFGQV DTSILVPMAD HIAFAAQRIS KNTPLSNPLT
PDIKALFPQE YEVAARGGEL IRQQTGVVFS DDELGYIALH VHSSLESMQV SQAMQTAAII
RECVDLVQQE TGVVIDVSSL SYNRLMSHIK YMAARLIKGE KLSMDVNTIM RQSCPKAFDI
AQEICRQLER SLGRQVDEAE VGYLAMHVQR VFSTEPSVC
//