ID F4XEP4_9FIRM Unreviewed; 661 AA.
AC F4XEP4;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=TRAP C4-dicarboxylate transport system permease DctM subunit domain-containing protein {ECO:0000259|Pfam:PF06808};
GN ORFNames=HMPREF0866_01564 {ECO:0000313|EMBL:EGJ46544.1};
OS Ruminococcaceae bacterium D16.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae.
OX NCBI_TaxID=552398 {ECO:0000313|EMBL:EGJ46544.1, ECO:0000313|Proteomes:UP000002801};
RN [1] {ECO:0000313|Proteomes:UP000002801}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D16 {ECO:0000313|Proteomes:UP000002801};
RG The Broad Institute Genome Sequencing Platform;
RA Ward D., Earl A., Feldgarden M., Gevers D., Young S., Zeng Q., Koehrsen M.,
RA Alvarado L., Berlin A.M., Borenstein D., Chapman S.B., Chen Z., Engels R.,
RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E.R.,
RA Heiman D.I., Hepburn T.A., Howarth C., Jen D., Larson L., Mehta T.,
RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D.,
RA Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., Yandava C.,
RA Sibley C.D., White A.P., Crowley S., Surette M.G., Strauss J.C.,
RA Ambrose C.E., Allen-Vercoe E., Haas B., Nusbaum C., Birren B.;
RT "The Genome Sequence of Clostridium sp. D5.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EGJ46544.1, ECO:0000313|Proteomes:UP000002801}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D16 {ECO:0000313|EMBL:EGJ46544.1,
RC ECO:0000313|Proteomes:UP000002801};
RG The Broad Institute Genomics Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Sibley C.D., White A.P.,
RA Crowley S., Surette M.G., Strauss J.C., Ambrose C.E., Allen-Vercoe E.,
RA Walker B., Young S., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Allen A.W., Alvarado L., Arachchi H.M., Berlin A.M.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sisk P.,
RA Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Ruminococcaceae bacterium D16.";
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGJ46544.1}.
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DR EMBL; ADDX02000003; EGJ46544.1; -; Genomic_DNA.
DR AlphaFoldDB; F4XEP4; -.
DR STRING; 552398.HMPREF0866_01564; -.
DR eggNOG; COG4666; Bacteria.
DR HOGENOM; CLU_007041_3_1_9; -.
DR OrthoDB; 9759894at2; -.
DR Proteomes; UP000002801; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR010656; DctM.
DR InterPro; IPR011853; TRAP_DctM-Dct_fused.
DR NCBIfam; TIGR02123; TRAP_fused; 1.
DR PANTHER; PTHR43849; BLL3936 PROTEIN; 1.
DR PANTHER; PTHR43849:SF2; BLL3936 PROTEIN; 1.
DR Pfam; PF06808; DctM; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002801};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 48..68
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 74..91
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 103..123
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 135..153
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 160..179
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 199..217
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 283..308
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 320..341
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 362..379
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 385..403
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 424..448
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 454..477
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 484..503
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 509..532
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 552..571
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 583..606
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 618..651
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 148..570
FT /note="TRAP C4-dicarboxylate transport system permease DctM
FT subunit"
FT /evidence="ECO:0000259|Pfam:PF06808"
SQ SEQUENCE 661 AA; 70200 MW; AFDA2E7F494A6475 CRC64;
MDYEKEREKQ AAAADVEADV NVADAVDEVM KKYDRESNTR IWEGKPKLVV KTIMALFSLY
CIIVTLFVSG LLEVRLTMFL GLILIIGYLN YPVKKGYMKV NYIPWYDLVI MVLGAGSFFY
FAANAKDILL KATKVTNEPF MVAIAIIGVL ALAELCRRCV GLPILCVAGA LLIYTFANVR
FGKVIYDLFY TTSGVMGTPV KVCATYIVVF IIFGAFLERT GISNFFIDLA NSVAGSSSGG
PAKVAVISSA LCGMVSGSSV GNTVTTGSVT IPMMKKTGYK PQFAGAVEAA ASTGGQIMPP
IMGAAAFLMA EYMGIPYAQV ALKAILPAIL YFTGIYIAVH LEAKKLGLKG IPREQLPKMR
KLLPKVYLLL PLVVLVVMVS LNMKTMQFCA AVAIVITILV GIVNKEDRIT PAKIFDALEA
GGKGTITVAV ACAMAGIVAG CITSTGLASK LITAIVKISG GQAIVALFLT MLCCIVLGMG
VPTTANYCIM ASTCAPILMS PAIGIPKVAA HFFVFYFGIV ADITPPVALA AYAGSAIAKA
PPMKTAFNAT RLAIAAFIVP YIFAFSPVML FEFSKGTSTA MMVVQIIQIC VTSLLGIFGV
AAALNGFLYK KINPLFRIIM AVGGLCMMIP GTVTDLIGLV LVAGICVYQY LSAKKDRSVA
A
//
