ID F5SW37_9GAMM Unreviewed; 526 AA.
AC F5SW37;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 60.
DE SubName: Full=Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domain containing protein {ECO:0000313|EMBL:EGL55758.1};
GN ORFNames=MAMP_02752 {ECO:0000313|EMBL:EGL55758.1};
OS Methylophaga aminisulfidivorans MP.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC Piscirickettsiaceae; Methylophaga.
OX NCBI_TaxID=1026882 {ECO:0000313|EMBL:EGL55758.1, ECO:0000313|Proteomes:UP000003544};
RN [1] {ECO:0000313|EMBL:EGL55758.1, ECO:0000313|Proteomes:UP000003544}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MP(T) {ECO:0000313|Proteomes:UP000003544};
RX PubMed=21685284; DOI=10.1128/JB.05403-11;
RA Han G.H., Kim W., Chun J., Kim S.W.;
RT "Draft genome sequence of Methylophaga aminisulfidivorans MP T.";
RL J. Bacteriol. 193:4265-4265(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGL55758.1}.
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DR EMBL; AFIG01000001; EGL55758.1; -; Genomic_DNA.
DR RefSeq; WP_007145644.1; NZ_AFIG01000001.1.
DR AlphaFoldDB; F5SW37; -.
DR STRING; 1026882.MAMP_02752; -.
DR eggNOG; COG3604; Bacteria.
DR OrthoDB; 5297379at2; -.
DR Proteomes; UP000003544; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF35; ANAEROBIC NITRIC OXIDE REDUCTASE TRANSCRIPTION REGULATOR NORR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000003544};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 194..423
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 526 AA; 58078 MW; 44DB905257E53371 CRC64;
MSLNSHHLLV EVALDLANSL NTGDRFDRLL GSIRKAISCD AVVLLGFRDG MLTPLAMQGL
SSDVLGRRFL LAEHPRLQHI CESNKPLLFA NDCDLPDPYD GLLVSQLGNL PIHSCMGLPL
YSDNQLIGVV TLDSFKPHAF DDIELKTLEL ITALSAATLK TALEFKKLEL SAHHAQEVVK
ELTQEALLKD GGEIIGQSPV MQTLKNNIEL VSGSNFTVLI TGETGVGKEL VARKIHQLSD
RKTAPLVYLN CASLPESLVE SELFGHTKGA FTGADKARAG KFQLANGGTL FLDEVGELPL
STQSKLLRVL QSGEIQPVGQ DKVEHVDVRI IAATNRNLEK EVENEQFRSD LYHRLMVYPI
HLPSLKDRGE DVLLLAGYFL ERISRQLNIR QLRLTSEANT SLLNYSWPGN VRELEHVISR
AALRAKAISP HQAIVSLTSE LLEITSEKPV GNLPEVDTNP ANSLPNMSLK TATEAFQKRI
IAHALQQADG NWAHAAKQLQ MDRSNLIRMA KRLNINVHKN TQITFN
//
