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Database: UniProt
Entry: F5Y170_RAMTT
LinkDB: F5Y170_RAMTT
Original site: F5Y170_RAMTT 
ID   F5Y170_RAMTT            Unreviewed;       231 AA.
AC   F5Y170;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   27-JUL-2011, sequence version 1.
DT   24-JAN-2024, entry version 58.
DE   SubName: Full=Transcriptional regulator, TetR family-like protein {ECO:0000313|EMBL:AEG93471.1};
GN   OrderedLocusNames=Rta_23730 {ECO:0000313|EMBL:AEG93471.1};
OS   Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 /
OS   TTB310).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Ramlibacter.
OX   NCBI_TaxID=365046 {ECO:0000313|EMBL:AEG93471.1, ECO:0000313|Proteomes:UP000008385};
RN   [1] {ECO:0000313|Proteomes:UP000008385}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310
RC   {ECO:0000313|Proteomes:UP000008385};
RA   Barakat M., Ortet P., De Luca G., Jourlin-Castelli C., Ansaldi M., Py B.,
RA   Fichant G., Coutinho P., Voulhoux R., Bastien O., Roy S., Marechal E.,
RA   Henrissat B., Quentin Y., Noirot P., Filloux A., Mejean V., DuBow M.,
RA   Barras F., Heulin T.;
RT   "Genome of the cyst-dividing bacterium Ramlibacter tataouinensis.";
RL   Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:AEG93471.1, ECO:0000313|Proteomes:UP000008385}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310
RC   {ECO:0000313|Proteomes:UP000008385};
RX   PubMed=21912644; DOI=10.1371/journal.pone.0023784;
RA   De Luca G., Barakat M., Ortet P., Fochesato S., Jourlin-Castelli C.,
RA   Ansaldi M., Py B., Fichant G., Coutinho P.M., Voulhoux R., Bastien O.,
RA   Marechal E., Henrissat B., Quentin Y., Noirot P., Filloux A., Mejean V.,
RA   Dubow M.S., Barras F., Barbe V., Weissenbach J., Mihalcescu I.,
RA   Vermeglio A., Achouak W., Heulin T.;
RT   "The Cyst-Dividing Bacterium Ramlibacter tataouinensis TTB310 Genome
RT   Reveals a Well-Stocked Toolbox for Adaptation to a Desert Environment.";
RL   PLoS ONE 6:E23784-E23784(2011).
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DR   EMBL; CP000245; AEG93471.1; -; Genomic_DNA.
DR   AlphaFoldDB; F5Y170; -.
DR   STRING; 365046.Rta_23730; -.
DR   KEGG; rta:Rta_23730; -.
DR   PATRIC; fig|365046.3.peg.2430; -.
DR   eggNOG; COG1309; Bacteria.
DR   HOGENOM; CLU_069356_1_2_4; -.
DR   OMA; CKANIFH; -.
DR   Proteomes; UP000008385; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.357.10; Tetracycline Repressor, domain 2; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001647; HTH_TetR.
DR   InterPro; IPR041474; NicS_C.
DR   InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR   PANTHER; PTHR30328:SF54; HTH-TYPE TRANSCRIPTIONAL REPRESSOR SCO4008; 1.
DR   PANTHER; PTHR30328; TRANSCRIPTIONAL REPRESSOR; 1.
DR   Pfam; PF17938; TetR_C_29; 1.
DR   Pfam; PF00440; TetR_N; 1.
DR   PRINTS; PR00455; HTHTETR.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF48498; Tetracyclin repressor-like, C-terminal domain; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008385}.
FT   DOMAIN          32..92
FT                   /note="HTH tetR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50977"
FT   DNA_BIND        55..74
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00335"
SQ   SEQUENCE   231 AA;  26729 MW;  0202E63A704CB11E CRC64;
     MHELDFINHP VNYGDMTRDA MPVTEERLRD ADRSQGTILA AARGEFAEFG LGGARMDRIA
     ERAGLNKRLI YYYFTDKEAL FQAVLEQAYR DIREAEQRLN LLELKPAEAL RRLVEFTWNY
     YLDHPEFLTL LNSANLHKAR HLQESQRARE LNSPLIEMLA QILERGRREG SLRGGVDPLQ
     LYISIAALPY FYLSNNHTLS AIFGRDLMTA KARNERLSHM CDLILGYVLR D
//
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