ID   F5ZG46_ALTNA            Unreviewed;       790 AA.
AC   F5ZG46;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   27-JUL-2011, sequence version 1.
DT   27-MAR-2024, entry version 61.
DE   SubName: Full=Transcriptional accessory protein {ECO:0000313|EMBL:AEF05814.1};
GN   OrderedLocusNames=ambt_21625 {ECO:0000313|EMBL:AEF05814.1};
OS   Alteromonas naphthalenivorans.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC   Alteromonadaceae; Alteromonas/Salinimonas group; Alteromonas.
OX   NCBI_TaxID=715451 {ECO:0000313|EMBL:AEF05814.1, ECO:0000313|Proteomes:UP000000683};
RN   [1] {ECO:0000313|EMBL:AEF05814.1, ECO:0000313|Proteomes:UP000000683}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 17741 / KACC 18427 / KCTC 11700BP / SN2
RC   {ECO:0000313|Proteomes:UP000000683};
RX   PubMed=21705606; DOI=10.1128/JB.05252-11;
RA   Jin H.M., Jeong H., Moon E.J., Math R.K., Lee K., Kim H.J., Jeon C.O.,
RA   Oh T.K., Kim J.F.;
RT   "Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading
RT   bacterium Alteromonas sp. strain SN2.";
RL   J. Bacteriol. 193:4292-4293(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002339; AEF05814.1; -; Genomic_DNA.
DR   RefSeq; WP_013786713.1; NC_015554.1.
DR   AlphaFoldDB; F5ZG46; -.
DR   KEGG; alt:ambt_21625; -.
DR   eggNOG; COG2183; Bacteria.
DR   HOGENOM; CLU_009833_0_2_6; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000000683; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
FT   DOMAIN          649..718
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   REGION          719..790
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        719..757
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        765..779
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   790 AA;  86127 MW;  826005D77893D548 CRC64;
     MIINKISEEL AVQTSQVSAA VKLLDEGSTV PFIARYRKEA TQGLDDTQLR TLQQRLTYLR
     ELEDRRQVIL KSIDEQGKLS DELKRNITGA DSKTTLEDLY LPFKPRRRTK GQIAIEAGLE
     GLADTLFANP DQSIDELAAE YVNAEKGVAD TKAALEGARF ILMERFAEDA ALLGKIRNYL
     VENAHIKSTV ANGKAQEAVK YKDYFEHSEK YKNAPSHRAL AMFRGRNEGM LNIQLDADPQ
     QDDASAPSHC EHLIASHYNI MHRQRPADDF LTQVVQWAWK IKIALHMETE LFSSLRERAE
     EEAIEVFAKN LNDLLMAAPA GAKTTMGLDP GLRTGVKVAI VDKTGKVVAK NTIFPHAPQN
     QWDKSLRTLT TVCKQHKVEL ISIGNGTGSR ETDKLVGEML KNNPELGAQK IVVSEAGASV
     YSASELASNE LPDLDVSIRG AVSIARRLQD PLAELVKIEP KAIGVGQYQH DVSQSQLGKS
     LDRVIEDCVN AVGVDLNTAS PALLSYVSGL NKTLANNIVQ FRDTNGAFDN RKALMKVERL
     GPKAFEQAAG FLRIVNGSNP LDASAVHPEA YPVVDKIVDT AAVAVNDLIG NTELLKTLSP
     DTFTSDAFGL PTVKDILSEL DKPGRDPRPE FKTATFKEGV ETIKDLTPGM ILEGVVSNVA
     NFGAFVDVGV HQDGLVHISA LTNKFISDPR DVVKAGDIVK VKVLEVDVPR KRISFTMRLE
     DTPTSSNQAG KINNSNGAAN AKSNGNPRAN GSQRGNPRAD KPNKRGGGQS QQQNSAMGNA
     FADAFAKAKK
//