ID F6B5U4_DESCC Unreviewed; 204 AA.
AC F6B5U4;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 70.
DE SubName: Full=DNA binding domain protein, excisionase family {ECO:0000313|EMBL:AEF93167.1};
GN OrderedLocusNames=Desca_0263 {ECO:0000313|EMBL:AEF93167.1}, Desca_2597
GN {ECO:0000313|EMBL:AEF95416.1};
OS Desulfotomaculum nigrificans (strain DSM 14880 / VKM B-2319 / CO-1-SRB)
OS (Desulfotomaculum carboxydivorans).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Desulfotomaculaceae;
OC Desulfotomaculum.
OX NCBI_TaxID=868595 {ECO:0000313|EMBL:AEF93167.1, ECO:0000313|Proteomes:UP000009226};
RN [1] {ECO:0000313|EMBL:AEF93167.1, ECO:0000313|Proteomes:UP000009226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CO-1-SRB {ECO:0000313|EMBL:AEF93167.1}, and DSM 14880 / VKM
RC B-2319 / CO-1-SRB {ECO:0000313|Proteomes:UP000009226};
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Mikhailova N., Lu M., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Pagani I., Stams A., Plugge C., Muyzer G.,
RA Kuever J., Parshina S., Ivanova A., Nazina T., Woyke T.;
RT "Complete sequence of Desulfotomaculum carboxydivorans CO-1-SRB.";
RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AEF93167.1, ECO:0000313|Proteomes:UP000009226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14880 / VKM B-2319 / CO-1-SRB
RC {ECO:0000313|Proteomes:UP000009226};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Mikhailova N., Lu M., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Pagani I., Stams A., Plugge C., Muyzer G.,
RA Kuever J., Parshina S., Ivanova A., Nazina T., Woyke T.;
RT "Complete sequence of Desulfotomaculum carboxydivorans CO-1-SRB.";
RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002736; AEF93167.1; -; Genomic_DNA.
DR EMBL; CP002736; AEF95416.1; -; Genomic_DNA.
DR RefSeq; WP_013809498.1; NC_015565.1.
DR AlphaFoldDB; F6B5U4; -.
DR STRING; 868595.Desca_0263; -.
DR KEGG; dca:Desca_0263; -.
DR KEGG; dca:Desca_2597; -.
DR eggNOG; COG2452; Bacteria.
DR HOGENOM; CLU_082093_0_1_9; -.
DR Proteomes; UP000009226; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000150; F:DNA strand exchange activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd04762; HTH_MerR-trunc; 1.
DR CDD; cd03769; SR_IS607_transposase_like; 1.
DR Gene3D; 1.10.1660.10; -; 1.
DR Gene3D; 1.10.287.2170; -; 1.
DR Gene3D; 3.40.50.1390; Resolvase, N-terminal catalytic domain; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR041718; IS607_transposase-like.
DR InterPro; IPR000551; MerR-type_HTH_dom.
DR InterPro; IPR006118; Recombinase_CS.
DR InterPro; IPR006119; Resolv_N.
DR InterPro; IPR036162; Resolvase-like_N_sf.
DR InterPro; IPR010093; SinI_DNA-bd.
DR InterPro; IPR048046; Transpos_IS607.
DR NCBIfam; TIGR01764; excise; 1.
DR NCBIfam; NF033518; transpos_IS607; 1.
DR PANTHER; PTHR36172; -; 1.
DR PANTHER; PTHR36172:SF1; TRANSPOSASE IS605 ORFB C-TERMINAL DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00376; MerR; 1.
DR Pfam; PF00239; Resolvase; 1.
DR SMART; SM00422; HTH_MERR; 1.
DR SMART; SM00857; Resolvase; 1.
DR SUPFAM; SSF46955; Putative DNA-binding domain; 1.
DR SUPFAM; SSF53041; Resolvase-like; 1.
DR PROSITE; PS50937; HTH_MERR_2; 1.
DR PROSITE; PS00397; RECOMBINASES_1; 1.
DR PROSITE; PS51736; RECOMBINASES_3; 1.
PE 4: Predicted;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000009226}.
FT DOMAIN 1..44
FT /note="HTH merR-type"
FT /evidence="ECO:0000259|PROSITE:PS50937"
FT DOMAIN 56..204
FT /note="Resolvase/invertase-type recombinase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS51736"
FT ACT_SITE 64
FT /note="O-(5'-phospho-DNA)-serine intermediate"
FT /evidence="ECO:0000256|PIRSR:PIRSR606118-50,
FT ECO:0000256|PROSITE-ProRule:PRU10137"
SQ SEQUENCE 204 AA; 23799 MW; A824388018910EF8 CRC64;
MYSIQEAAKL LGVSISTMRR WEKEGKIKPI RTQGGHRRYT LEELSQIKPL QYDTKLTIAY
CRVSSSDQKE DLQRQIENVS QYCTAKGYSF KVITDIGSGL NYNKKGLKEL LHLVQSNKLE
RIVVNYKDRL IRFGYEIIEQ ICEFHGVTIE IINHTEDKTY EQELVEDILS IITLFSSRLY
GSRSHKQKKI QKEAAKWFKE SDAI
//
