ID F6GSR2_VITVI Unreviewed; 807 AA.
AC F6GSR2;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE RecName: Full=Pentatricopeptide repeat-containing protein, chloroplastic {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_17s0000g08280 {ECO:0000313|EMBL:CCB42985.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB42985.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
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DR EMBL; FN594950; CCB42985.1; -; Genomic_DNA.
DR RefSeq; XP_002279639.1; XM_002279603.3.
DR RefSeq; XP_010663182.1; XM_010664880.2.
DR RefSeq; XP_019082084.1; XM_019226539.1.
DR AlphaFoldDB; F6GSR2; -.
DR PaxDb; 29760-VIT_17s0000g08280-t01; -.
DR EnsemblPlants; Vitvi17g00808_t001; Vitvi17g00808_P001; Vitvi17g00808.
DR GeneID; 100260332; -.
DR Gramene; Vitvi17g00808_t001; Vitvi17g00808_P001; Vitvi17g00808.
DR KEGG; vvi:100260332; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_6_1; -.
DR InParanoid; F6GSR2; -.
DR OrthoDB; 1204889at2759; -.
DR Proteomes; UP000009183; Chromosome 17.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 143..177
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 281..315
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 483..517
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 584..618
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 619..654
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 807 AA; 90323 MW; 30B49FF1A609BC45 CRC64;
MVLVRPLNSP LLPLYPDQFN LQTPSKTPHH ISNLVIVTSP VSCSLRFQKF NYNPIQKWSS
KPLSTKIQTF VSVSFANNVI REYTEDGFFD DAIGVYLKML DDGVKVEEFR YFPCLIKAFG
GLCDVYKGRQ IHGHVLKLGV LDDVSVVNSL LTMYWKCGVV EDAVQMFEKM PEVDLVSWNT
MISGFQKSMD YTRSLMFFRS MVWEFGIYPN RVACVSSILS CSSLQSLTHG REIHGVVVKS
GLDVEEYLVS SLIEMYMKCG SIKNAENIFN SILDKDSVRR NAVIWNVMIS GYVSNGCFSQ
ALLLFIKMMV WGIKPDYSTM VSLFSLCSES LDIAFGKQIH GLIFKFGLKN NIRVETALLD
MYLKCGDMGT GLKIFRRSQN HNLIMWSAVI SNCAQSGCPT KALELFYEFK MEDGLADSGI
LVAVLRACSS LTLKPEGMQI HGLATKMGFV SDVFVGSALV DLYAKCRDMG YSKKVFLRLS
QKDLVSWNAL ISGYAQDECA DEALKAFRDM QLEEIRPNTV TIACILSVCA HLSVMTLCKE
VHGYLIRQGL GSTVLVSNSL IATYAKCGDI NSSLYTFEKM PERNDVSWNS IILGMGMHSR
TDEMIVLFDK MVASGIKPDH VTFTAILSAC SHAGRVDEGC KYFKSMVEDF NLKPQLEQYT
CMVDLLGRAG HLNQAYDLIM AMPCTPDDRI WGSLLGSCKN HGDEILAEIV ANHIFKLVPS
SVGYRVLLAN LYENLGKGRE GSKVRSEIKD MGLKKKPGCS WIEVDNNFHI FIAGDRSHSQ
SDEIYAAVES LTTEIKRAGY IPQIYSY
//
