ID F6GU70_VITVI Unreviewed; 447 AA.
AC F6GU70;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN OrderedLocusNames=VIT_06s0004g08300 {ECO:0000313|EMBL:CCB43386.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB43386.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
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DR EMBL; FN594951; CCB43386.1; -; Genomic_DNA.
DR RefSeq; XP_002275951.1; XM_002275915.4.
DR AlphaFoldDB; F6GU70; -.
DR PaxDb; 29760-VIT_06s0004g08300-t01; -.
DR EnsemblPlants; Vitvi06g00826_t001; Vitvi06g00826_P001; Vitvi06g00826.
DR GeneID; 100260395; -.
DR Gramene; Vitvi06g00826_t001; Vitvi06g00826_P001; Vitvi06g00826.
DR KEGG; vvi:100260395; -.
DR eggNOG; KOG0802; Eukaryota.
DR eggNOG; KOG4638; Eukaryota.
DR HOGENOM; CLU_039460_0_1_1; -.
DR InParanoid; F6GU70; -.
DR OrthoDB; 4593171at2759; -.
DR Proteomes; UP000009183; Chromosome 6.
DR ExpressionAtlas; F6GU70; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR GO; GO:1904294; P:positive regulation of ERAD pathway; IEA:InterPro.
DR CDD; cd16532; RING-HC_RNFT1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR044235; RNFT1/2.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR15860:SF31; RING-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR15860; UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT TRANSMEM 216..237
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 257..282
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 303..323
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 386..424
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 38..149
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..74
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 101..149
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 447 AA; 50154 MW; 09A1490CAA0DBD93 CRC64;
METSGSNSRY GIHIAASNFI QAPLAALLEY SGIFSTRSSS SQETDGLIAP SPASLDSFHS
RSDDRDRDHD PSTPASTPEE VSIRIIGAGE QEREAVSLDN DRSSSEQISE APAVSDASRN
ESGSGVAAVN SGGSTADGEP ANGGSVNNRD SSYQRYDIQQ FARWIEQILP FSLLLLVVFI
RQHLQGFFVT IWIAAVMFKS NDILRKQTAL KGERKLSVLT GITAVFMLHV ICVYWWYRNN
DLLYPLVLLP PKAIPPFWHA IFIIMVNDTM VRQAAMALKC ILLMYYKNSR GRDYRKQGQM
LTLVEYLLLL YRALLPTPVW YRFFLNKEYG SLFSSLTTGL YLTFKLTSVV EKVQSFFAAL
RALSRKEVHY GSYATSEQVN AAGDLCAICQ EKMHAPILLR CKHIFCEDCV SEWFERERTC
PLCRALVKPA DIRSYGDGST SLFFQIF
//
