ID F6H1Y6_VITVI Unreviewed; 1115 AA.
AC F6H1Y6;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE RecName: Full=Ionotropic glutamate receptor C-terminal domain-containing protein {ECO:0000259|SMART:SM00079};
GN OrderedLocusNames=VIT_19s0014g01760 {ECO:0000313|EMBL:CCB46282.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB46282.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the glutamate-gated ion channel (TC 1.A.10.1)
CC family. {ECO:0000256|ARBA:ARBA00008685}.
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DR EMBL; FN595229; CCB46282.1; -; Genomic_DNA.
DR AlphaFoldDB; F6H1Y6; -.
DR PaxDb; 29760-VIT_19s0014g01760-t01; -.
DR eggNOG; KOG1052; Eukaryota.
DR HOGENOM; CLU_004711_0_0_1; -.
DR InParanoid; F6H1Y6; -.
DR Proteomes; UP000009183; Chromosome 19.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0015276; F:ligand-gated monoatomic ion channel activity; IBA:GO_Central.
DR GO; GO:0038023; F:signaling receptor activity; IBA:GO_Central.
DR CDD; cd13686; GluR_Plant; 1.
DR Gene3D; 1.10.287.70; -; 1.
DR Gene3D; 3.40.50.2300; -; 4.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR InterPro; IPR001828; ANF_lig-bd_rcpt.
DR InterPro; IPR015683; Ionotropic_Glu_rcpt.
DR InterPro; IPR001320; Iontro_rcpt_C.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR001638; Solute-binding_3/MltF_N.
DR PANTHER; PTHR18966; IONOTROPIC GLUTAMATE RECEPTOR; 1.
DR PANTHER; PTHR18966:SF463; IONOTROPIC GLUTAMATE RECEPTOR C-TERMINAL DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01094; ANF_receptor; 3.
DR Pfam; PF00060; Lig_chan; 1.
DR Pfam; PF00497; SBP_bac_3; 1.
DR SMART; SM00079; PBPe; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 3.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 2.
PE 3: Inferred from homology;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Ion channel {ECO:0000256|ARBA:ARBA00023303};
KW Ion transport {ECO:0000256|ARBA:ARBA00023065};
KW Ligand-gated ion channel {ECO:0000256|ARBA:ARBA00023286};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00022448}.
FT TRANSMEM 780..799
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 811..832
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 838..859
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1019..1039
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1045..1067
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 659..998
FT /note="Ionotropic glutamate receptor C-terminal"
FT /evidence="ECO:0000259|SMART:SM00079"
SQ SEQUENCE 1115 AA; 124420 MW; 7A82FE05CD6FE4DC CRC64;
MKAVAAIIGS WGWRRINVIY EDTNSAGSEI IPFLADALKQ VGSEIGYLAA LPPSSAVNSS
SLSDQLQRLK GKQSQVFVVH SSLSMAERVF SKANELGMME KGSVWITTDS ITNLVHSMNS
SIISSMEGVL GMKSFFQEDG ARFQDFYSRF RQKFRSLYPK EDNHEPGIFA VRAYDAVWSV
ALAMDNNGST QQLLEKIELS DFHGLTNRIK FERRRLAPQR MFQIVNVIGK SYRELGFWSE
GSGFAKPTNG QIQNSSSMDI LGQVFWPGGL ISTPRGWVLP TSETPLRIGV PLNATFKQFV
SVTYDDGGNP SVSGFSIEVF KAVLKHLNYI LPYEFFPFSG IYDDLVEQVH LKDIPSSATG
AVLQLSEALK NVGIEIGHLL PLPPLSSSSS LVEEPQSLKE GQCRVFVVHT SLQLGVHLFE
TAKKMEMMKE VYVWIITDTI SSLVHSVKAS TISSSMDGIV GVKSYFNETT PQFKIFRGRF
RRKFISEHPD EEKNEPGIYA AKAYDATWAA ALAMKGGRDF YSRFRQKFRS LYPKEDNYEP
GIFAVRAYDA VWSVALAMDN NGSTQQLLEK IELSDFHGLT NRIKFERRRL APQRMFQIVN
VIGKSYRELG FWSEGSGFAK PTNGQIQNSS SMDILGQVFW PGGPTSTPRG WALPTSETPL
RIGVPLNATF KQFVSVTYDD GGNPSVSGFS IEVFKAVLKH LNYSLPHEFF PFSGTYDDLV
EQVHLKKFDA VVGDTSIVSK RWELAEFSHP YTEPGLMMIV PEKVETSNRA WLFMKPFTKA
MWVLTGAITI YNGFTLWLIE RNQNPELMTG SILNQMGTLV CLSFTTLFSM HGRQHSNLSR
LVMVVWLFAS LVITNSYTAN LTSMLTVQRL EPTVVDVEDL KSANSIVGCS GRSFVVRYLV
DVIRIKESNI KDITSAEEYA PALRSGEIAA AFIEAPYAKL FLAQNCKGFA ASGKTYKVGG
FGFVFPKGSS ILPDISKAVL EVSEKGELGV LENNLIGSQK CDSNAEISED SSSLSPSSFW
VLFLITGGVS TVCLVIFMAR ERLTYLYNYL LGHMAIWRLI SAVMRSWRSH PRGRFSRGIS
DVESNGNAQH TSIHSPQYFG YRVPWQRNYS SRSSS
//
