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Database: UniProt
Entry: F6H6E1_VITVI
LinkDB: F6H6E1_VITVI
Original site: F6H6E1_VITVI 
ID   F6H6E1_VITVI            Unreviewed;       293 AA.
AC   F6H6E1;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   27-JUL-2011, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   RecName: Full=Wall-associated receptor kinase galacturonan-binding domain-containing protein {ECO:0000259|Pfam:PF13947};
GN   OrderedLocusNames=VIT_16s0050g02750 {ECO:0000313|EMBL:CCB47748.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB47748.1, ECO:0000313|Proteomes:UP000009183};
RN   [1] {ECO:0000313|Proteomes:UP000009183}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX   PubMed=17721507; DOI=10.1038/nature06148;
RG   The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA   Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA   Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA   Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA   Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA   Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA   Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA   Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA   Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA   Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA   Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA   Wincker P.;
RT   "The grapevine genome sequence suggests ancestral hexaploidization in major
RT   angiosperm phyla.";
RL   Nature 449:463-467(2007).
CC   -!- PATHWAY: Protein modification; protein ubiquitination.
CC       {ECO:0000256|ARBA:ARBA00004906}.
CC   -!- SIMILARITY: Belongs to the RING-type zinc finger family. ATL subfamily.
CC       {ECO:0000256|ARBA:ARBA00024209}.
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DR   EMBL; FN595243; CCB47748.1; -; Genomic_DNA.
DR   AlphaFoldDB; F6H6E1; -.
DR   PaxDb; 29760-VIT_16s0050g02750-t01; -.
DR   eggNOG; KOG1187; Eukaryota.
DR   HOGENOM; CLU_000288_38_3_1; -.
DR   InParanoid; F6H6E1; -.
DR   Proteomes; UP000009183; Chromosome 16.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0030247; F:polysaccharide binding; IEA:InterPro.
DR   InterPro; IPR046948; ATL20-22-like.
DR   InterPro; IPR025287; WAK_GUB.
DR   PANTHER; PTHR46279:SF9; OS01G0116300 PROTEIN; 1.
DR   PANTHER; PTHR46279; RING/U-BOX SUPERFAMILY PROTEIN; 1.
DR   Pfam; PF13947; GUB_WAK_bind; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        211..231
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          8..74
FT                   /note="Wall-associated receptor kinase galacturonan-
FT                   binding"
FT                   /evidence="ECO:0000259|Pfam:PF13947"
SQ   SEQUENCE   293 AA;  33210 MW;  B07FEEA976B33CCB CRC64;
     MRGGRGECPT SNRCGVQGPL IQFPFRLKSQ PHHCGYPGFV LSCTENNQIM LELPDSVKLL
     VKNIIYESRE IIVQNPDNCL ERQLRNLSLA SSPFQFKFEG DVTFFNCSLL KTAESFAAHF
     IPCLSIPGNP VYAVDSFYPL QNMDLSSCRR LYNASVGYHV FTDYKFNGSA FSLKWPKSIC
     GSCLRGHICR LKKSNSKEPE TECIKGVSKQ AMVTGTIFGF FLLVLVIAMF YRLYSSDKLE
     RENGIKVKRF LEDYEALKPS RYSYADIKRI TNQFKDKLGQ GGYGTVYKGK LSH
//
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