ID F6HAK7_VITVI Unreviewed; 302 AA.
AC F6HAK7;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE RecName: Full=rRNA-processing protein EBP2-like {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_16s0022g01800 {ECO:0000313|EMBL:CCB49264.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB49264.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the EBP2 family.
CC {ECO:0000256|ARBA:ARBA00007336}.
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DR EMBL; FN595506; CCB49264.1; -; Genomic_DNA.
DR RefSeq; XP_002267474.1; XM_002267438.3.
DR AlphaFoldDB; F6HAK7; -.
DR STRING; 29760.F6HAK7; -.
DR PaxDb; 29760-VIT_16s0022g01800-t01; -.
DR EnsemblPlants; Vitvi16g00834_t001; Vitvi16g00834_P001; Vitvi16g00834.
DR GeneID; 100249807; -.
DR Gramene; Vitvi16g00834_t001; Vitvi16g00834_P001; Vitvi16g00834.
DR KEGG; vvi:100249807; -.
DR eggNOG; KOG3080; Eukaryota.
DR HOGENOM; CLU_036007_4_0_1; -.
DR InParanoid; F6HAK7; -.
DR OrthoDB; 11782at2759; -.
DR Proteomes; UP000009183; Chromosome 16.
DR GO; GO:0034399; C:nuclear periphery; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IBA:GO_Central.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR InterPro; IPR008610; Ebp2.
DR PANTHER; PTHR13028; RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED; 1.
DR PANTHER; PTHR13028:SF0; RRNA-PROCESSING PROTEIN EBP2-RELATED; 1.
DR Pfam; PF05890; Ebp2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517}.
FT REGION 1..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 163..302
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..40
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 163..200
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 209..230
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 247..266
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 277..295
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 302 AA; 34553 MW; 1588DAFCE4A88F0D CRC64;
MVVRKEDPTL SDEDMMEDNE TGDLYEEESE LESESEEDED VKLAEPSKTS IYNKDGLLDK
LGDISWPENV GWIHKLSINI DQEQEVDVND DSAREGSFSI LALKGTRQAF ENLQSMGLPF
LRPSDYYAEM VKTDSHMEKV KGRLLAQKKQ IEEADERRKA REAKRIAKEV QSQKLKERAK
QKKEDIESVK RWRKQRQQSG FSKDNNEADE MSLAFEDGKA FERSNKRRPG VAPGDRSGGK
ARQFGGNGKK GMEKNKKKRD NKNSKFGFGG RKGLKKQNST ETTDDFRGFN KGESTGNKKR
KR
//
